Gene detail information of Glyur002006s00031345 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G05755.1 | 4.00E-56 | Nodulin MtN21 /EamA-like transporter family protein |
| NR | KEH35139.1 | 8.99E-115 | nodulin MtN21/EamA-like transporter family protein [Medicago truncatula] |
| COG | YP_004776803.1 | 2.00E-08 | hypothetical protein [Cyclobacterium marinum DSM 745] |
| trEMBL | tr|A0A072UZA3|A0A072UZA3_MEDTR | 3.00E-115 | Nodulin MtN21/EamA-like transporter family protein {ECO:0000313|EMBL:KEH35139.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02006 | 46808 | 50301 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002006s00031345.1 | PF00892.15 | EamA | 125 | 239 | 1.90E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.309 |
| SRR1783600 | control | 10.008 |
| SRR1783602 | moderate drought stress | 9.390 |
| SRR1811619 | moderate drought stress | 9.325 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.836 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.116 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.251 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.410 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.266 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.770 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.590 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.767 |
| SRR2868004 | Drought Stress (root) | 3.828 |
| SRR2967015 | Control (root) | 4.638 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.716 |
| SRR9715740 | Leaf | 3.073 |
| SRR9715741 | Leaf | 2.487 |
| SRR9715739 | Root | 3.677 |
| SRR9715742 | Root | 2.441 |
| SRR9715743 | Root | 2.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.484 |
| SRR8749028 | MeJA induced 9h | 1.701 |
| SRR8749029 | MeJA induced 9h | 0.623 |
| SRR8749030 | Uninduced | 1.299 |
| SRR8749031 | Uninduced | 0.764 |
| SRR8749032 | Uninduced | 0.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.186 |
| SRR8400027 | Control - Root | 6.921 |