Gene detail

Gene detail information of Glyur002006s00031340

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G51630.1	2.00E-16	Disease resistance protein (TIR-NBS-LRR class) family
NR	AES71667.2	4.11E-106	disease resistance protein (TIR-NBS-LRR class), putative [Medicago truncatula]
Swissprot	tr\|Q9SZ67\|WRK19_ARATH	2.00E-19	Probable WRKY transcription factor 19
trEMBL	tr\|G7J7A7\|G7J7A7_MEDTR	2.00E-106	Disease resistance protein (TIR-NBS-LRR class), putative {ECO:0000313\|EMBL:AES71667.2}

Sequence

Transcript Sequence

>Glyur002006s00031340.1
ATGGTTGGACATGAAACAGAACTCATTGAAGAAGTTGTTGCACAAGTATGGAAAAAACTGGAACTCAAATTCCCAACATATAATGATGGACTGGTTGCAATTGAGACAAGATTAGAAGAACTATATTCAATTNTAAAGCTAGAATTGGATGATGTTNGTTTCATAGGGATATGGGGCATGGGTGGGATTGGTAAAACAACTCTTGCTACAGCTCTCTTCAAGAAAATCAGAAGGCAATTTGATGTAAGTTGCTTCATTGCCAATGTTAGAGAGGTCTCTGGGGAAATTAATCGAGGACTGTTACAGTTACAAAATAAGATTCTTTCTCATCTGAACATAAAGGGAATGGGAACTGAACTTGTCCAAGGTATAGTTTTGAAGTCATCACCGTCTATGTCGTGTGATGCACATTGGGACCCTGATGCCTTCTCAAAGATGTTTAATCTTAGGTTACTCATTATATTGTGTGATTTGCATCTTTCCCTTGGTCTGGAATGTCTTCCGAGCTCACTAAAAGTGCTTGTATGGTGGAGATATCCATTGAATGCTCTACCACTTGGAGTTCAACTTGATGAGCTTGTTCACTTACAATTGAACGATAGTAAAGTTAAACAACTATGGAATGGAACTCGGTATTTTGGAAAGCTNAAAGTAATTGATTTGAGTAATTCCTATGATCTACGTCAAACTCCAGATATCTCTGGAGTTCCATCCCTTGAAGAGTTGTATCTTAATGATTGTACAAAACTCGTTAAAGTTCACCAATCTACCAGTCTACACAAAATGCTGAAGATATTGAGTTTGACGGGATGTGGCAATGATTACTCCCAGTACACGGAAATCCCATCTAGATTTGATAATCAGAAATTTTTTCCTTTGAACTCATCATATGTGTCAAAACTTGATTCAACTGCATCAGTAACAGTGGACATCCCTGATGATTGTNGTTCAAGTGATGGGTGGGAAGTTGCTGTATTTGTGGCCTTAGAGNCTCAAATTCCAGAGCATTCAGAGGAAATGGGTAAAGGTTTGGCAAGAGCCATGCGCCTGAGTTGGAACTTTGATACTCTAGAACCTGAAGATGGCCCCTCCTTATCTCTGGTCGCATGGACAACAGCATTTACTGACCATTACTTGTTCACAATGATGGTGTGTGGTGATTTTATATACATTCAGCGACACCTAAAAATGGGCCAAGAGTTCATAATTGGACGCTTGAGCAGGCATCGAAAGCCAGAGTTCAGGGAAAACAGTTCATTGCGGTTCGAAGTGCAAGTGAAAGGNCAAAAGATAAAGAAGTGTGGGTGGCGTTTGTTGCGGATAAAGGATCGTCTTCAAGACTTGCAAAAGGTGAACAGTCAAATTATTGAGGCATCTTCTAATTCTGAGCATTCAAGCGGTCTAAACAAATCAACTGTGGATGAATTCANGGGAGAAGAGGCTGATGCTGCTATGGATGTGCACAACATAGAAAGATCCGAGGAGAACTTCTCTTCGGGGAAAATGTTTCACAATATTAGTCAGGGACTATGTTTAATTGTNATAGCTTTGATGACATTGATGGTAGGGGCTACAATATTCCCTTCNCCTGGACATGGTCTGGGCTTTAATCAGCACATTGCAACAAATGAGGGAATGAGTAAACGATCAAAATCACATTGGGTTTCCCATGAAACTTCACTTAAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02006	17081	22590	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0043531 ADP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002006s00031340.1	PF00931.17	NB-ARC	47	114	9.20E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.514
SRR1783600	control	4.397
SRR1783602	moderate drought stress	4.247
SRR1811619	moderate drought stress	4.205

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.138
DRR006520	Root Summer glycyrrhizin high producing strain	0.140
DRR006521	Root Winter glycyrrhizin high producing strain	2.317
DRR006522	Root Winter glycyrrhizin high producing strain	1.944
DRR006523	Root Summer glycyrrhizin low producing strain	0.853
DRR006524	Root Summer glycyrrhizin low producing strain	1.035
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.046
SRR2868004	Drought Stress (root)	8.549
SRR2967015	Control (root)	7.501

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.094
SRR9715740	Leaf	0.095
SRR9715741	Leaf	0.097
SRR9715739	Root	0.155
SRR9715742	Root	1.218
SRR9715743	Root	1.222

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.728
SRR8749028	MeJA induced 9h	3.018
SRR8749029	MeJA induced 9h	2.845
SRR8749030	Uninduced	2.468
SRR8749031	Uninduced	2.729
SRR8749032	Uninduced	2.398

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.627
SRR8400027	Control - Root	2.120