Gene detail information of Glyur002004s00032217 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G09540.1 | 4.00E-30 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_007148369.1 | 0 | hypothetical protein PHAVU_006G202500g [Phaseolus vulgaris] |
| trEMBL | tr|V7BTK1|V7BTK1_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW20363.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02004 | 2257 | 3834 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002004s00032217.1 | PF00226.26 | DnaJ | 67 | 129 | 3.10E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.121 |
| SRR1783600 | control | 7.131 |
| SRR1783602 | moderate drought stress | 7.289 |
| SRR1811619 | moderate drought stress | 7.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.765 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.259 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.990 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.963 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.974 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.103 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.551 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.541 |
| SRR2868004 | Drought Stress (root) | 6.860 |
| SRR2967015 | Control (root) | 7.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.464 |
| SRR9715740 | Leaf | 2.790 |
| SRR9715741 | Leaf | 2.341 |
| SRR9715739 | Root | 12.157 |
| SRR9715742 | Root | 8.495 |
| SRR9715743 | Root | 9.427 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.086 |
| SRR8749028 | MeJA induced 9h | 1.052 |
| SRR8749029 | MeJA induced 9h | 0.678 |
| SRR8749030 | Uninduced | 0.060 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.789 |
| SRR8400027 | Control - Root | 9.966 |