Gene detail information of Glyur002002s00040221 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37850.1 | 7.00E-20 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | KHN38012.1 | 2.31E-80 | Transcription factor bHLH19-like protein [Glycine soja] |
| Swissprot | tr|Q9T072|BH025_ARATH | 2.00E-30 | Transcription factor bHLH25 |
| trEMBL | tr|C6T354|C6T354_SOYBN | 1.00E-79 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G23020.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02002 | 22769 | 29108 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.875 |
| SRR1783600 | control | 23.632 |
| SRR1783602 | moderate drought stress | 36.131 |
| SRR1811619 | moderate drought stress | 36.079 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.966 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.933 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.932 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.701 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.085 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 36.696 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.542 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.526 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.099 |
| SRR2868004 | Drought Stress (root) | 29.174 |
| SRR2967015 | Control (root) | 42.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.038 |
| SRR9715740 | Leaf | 10.276 |
| SRR9715741 | Leaf | 11.893 |
| SRR9715739 | Root | 4.474 |
| SRR9715742 | Root | 16.234 |
| SRR9715743 | Root | 12.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.815 |
| SRR8749028 | MeJA induced 9h | 5.281 |
| SRR8749029 | MeJA induced 9h | 2.200 |
| SRR8749030 | Uninduced | 1.989 |
| SRR8749031 | Uninduced | 0.416 |
| SRR8749032 | Uninduced | 0.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.731 |
| SRR8400027 | Control - Root | 37.365 |