Gene detail information of Glyur002001s00042310 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05340.1 | 9.00E-75 | Peroxidase superfamily protein |
| NR | XP_003522108.1 | 3.05E-154 | PREDICTED: cationic peroxidase 1-like [Glycine max] |
| Swissprot | tr|P22195|PER1_ARAHY | 3.00E-100 | Cationic peroxidase 1 (Precursor) |
| trEMBL | tr|I1JKZ8|I1JKZ8_SOYBN | 1.00E-154 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G04700.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02001 | 47047 | 50717 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00430 | E1.11.1.7 | EC:1.11.1.7 | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002001s00042310.1 | PF00141.18 | peroxidase | 45 | 191 | 5.20E-47 |
| Glyur002001s00042310.1 | PF00141.18 | peroxidase | 192 | 248 | 5.80E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.101 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.357 |
| SRR2868004 | Drought Stress (root) | 13.766 |
| SRR2967015 | Control (root) | 4.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.407 |
| SRR9715743 | Root | 0.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.074 |
| SRR8749028 | MeJA induced 9h | 0.931 |
| SRR8749029 | MeJA induced 9h | 0.470 |
| SRR8749030 | Uninduced | 4.678 |
| SRR8749031 | Uninduced | 0.314 |
| SRR8749032 | Uninduced | 0.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.984 |
| SRR8400027 | Control - Root | 15.458 |