Gene detail information of Glyur002000s00042409 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G38450.1 | 2.00E-16 | cytochrome P450, family 735, subfamily A, polypeptide 1 |
| NR | XP_003532338.1 | 2.05E-31 | PREDICTED: cytokinin hydroxylase-like [Glycine max] |
| COG | YP_003706560.1 | 3.00E-47 | cytochrome P450 [Truepera radiovictrix DSM 17093] |
| Swissprot | tr|Q9FF18|C7351_ARATH | 3.00E-24 | Cytokinin hydroxylase |
| trEMBL | tr|I1KZL2|I1KZL2_SOYBN | 8.00E-32 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G48030.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02000 | 12639 | 19378 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP735A1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002000s00042409.2 | PF00067.17 | p450 | 10 | 323 | 6.40E-68 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.924 |
| SRR1783600 | control | 2.018 |
| SRR1783602 | moderate drought stress | 2.795 |
| SRR1811619 | moderate drought stress | 2.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.289 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.353 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.351 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.289 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.807 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.140 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.262 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.484 |
| SRR2868004 | Drought Stress (root) | 2.589 |
| SRR2967015 | Control (root) | 3.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.105 |
| SRR9715740 | Leaf | 0.122 |
| SRR9715741 | Leaf | 0.203 |
| SRR9715739 | Root | 0.328 |
| SRR9715742 | Root | 6.228 |
| SRR9715743 | Root | 4.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.157 |
| SRR8749028 | MeJA induced 9h | 0.252 |
| SRR8749029 | MeJA induced 9h | 0.499 |
| SRR8749030 | Uninduced | 0.034 |
| SRR8749031 | Uninduced | 0.082 |
| SRR8749032 | Uninduced | 0.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.429 |
| SRR8400027 | Control - Root | 1.036 |