Gene detail

Gene detail information of Glyur001996s00039763

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G21760.1	2.00E-100	UDP-Glycosyltransferase superfamily protein
NR	ADV71363.1	0	glycosyltransferase GT03H24 [Pueraria montana var. lobata]
COG	YP_004967697.1	2.00E-06	glycosyl transferase family protein [Streptomyces bingchenggensis BCW-1]
Swissprot	tr\|Q66PF3\|UFOG3_FRAAN	1.00E-135	Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3 {ECO:0000250\|UniProtKB:Q2V6K0}
trEMBL	tr\|E9M5E8\|E9M5E8_PUEML	0	Glycosyltransferase GT03H24 {ECO:0000313\|EMBL:ADV71363.1}

Sequence

Transcript Sequence

>Glyur001996s00039763.1
ATGACTAGATTTGAGGTGGTCTTCATCGCTACCCCNGCCATCGGAAACCTTGTTCCAGCCGTGGAATTCGCTAACCTCCTAACCAAACACGANCCTCGATTCTCTGCAACCGTTCTCATCATCACCATCCCACAACGACCACTCGTCAACACCTACGCCCAAGCCCGTTCTTCCACCTCAGTCACTTCCAATCTCCGATTCCTCCACCTCCCTACCGTGGACCCTCCCACACCCGATCAGTACACTTCCTCCGTCGGCTTCCTCTGCCTCCTCATACAGAAACACAAGCACCATGTCAAAAACGTGCTCCTCAACCTCACCACGCCAACCGAGTCACACCGATCCGACTCAGTTCAACTCGCCGCCTTGTTCGTGGACATGTTCTCCACCACCATCATCGACGTTGCCGCCGAGCTCGCCGTCCCCTGCTACCTCTTCTTCGCGTCGCCGGCGAGCTTCCTCGGGTTCACGCTCCACCTCCCGCGAGTCGACTCGGAGACCGANTTCGAAATCCCGAGTTTCAAAAACCCGCTTCCCCGAACCGTTTTGCCCAACCTGGTGTTGAAAGCGAAGGAGGACGGGTATTCTTGGGTTTCATACCATGCGGGAAGGTACAGGGAAACAAAAGGAATCGTCATAAACACGTTACAAGAGCTTGAACCACACGCGCTTCAATCGCTTTACAACGATTCGCAATTGCCACCCGTTTACGCAATTGGGCCTGTTCTCGACCTTATTGGGCCTTCCCGATGGGACCCAAACCCGGCCCAANACAATCGGATCATGGAGTGGCTGGACACGCAGCCTCNGTCTTCAGTGGTTTTTCTTTGTTTNGGTAGCATGGGAAGCCTCGANGCGAAACAAGTGGAGGAGATCGCAATTGGGCTTGAACGGGCCGGGGTTAGATTTTTATGGGCTTTGCGGGAACCTCCAAAGGCCCAGTTGGAGGACCCAAGGGATTATGCAAATCACGAGGATGTTCTGCCGGATGGGTTTCTGGAACGAACGGCTGGGATGGGTCTCGTGTGCGGGTGGATCCCACAGGCGAAGGTTTTAGCCCACATGGCGGTGGGAGGGTTCGTTTCCCACTGTGGTTGGAACTCGTTGTTGGAGAGTTTGTGGCACGGTGTGCCGGTTGCCACATGGCCGGTCTACGCGGAGCAACAGATGAACGCGTTCGAGATGGTTAAGGAACTGGGTTTGGCGGTGGAGATTAGGGTGGATTATCGAGTGGGTGGGGATCTGGTGCCAGCGGAAGAAGTTGAGAATGGTGTCAGGTCACTGATGAACGGTTGTGATGAAATCAGGAGAAAAGTGAAGGAGATGAGTGATAAGTGTAGAGTGGCCTTGATGGAAAATGGATCATCTTACACTAACCTTGTGTCCCTGATTCATAAATTGACGAATTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01996	44612	46021	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001996s00039763.1	PF00201.13	UDPGT	264	409	1.40E-24

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.489
SRR1783600	control	9.776
SRR1783602	moderate drought stress	4.482
SRR1811619	moderate drought stress	4.475

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.074
DRR006520	Root Summer glycyrrhizin high producing strain	10.844
DRR006521	Root Winter glycyrrhizin high producing strain	4.180
DRR006522	Root Winter glycyrrhizin high producing strain	3.606
DRR006523	Root Summer glycyrrhizin low producing strain	0.999
DRR006524	Root Summer glycyrrhizin low producing strain	1.213
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.802
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.753

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.532
SRR2868004	Drought Stress (root)	8.001
SRR2967015	Control (root)	7.474

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.041
SRR9715740	Leaf	4.067
SRR9715741	Leaf	7.768
SRR9715739	Root	14.130
SRR9715742	Root	19.009
SRR9715743	Root	14.706

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.048
SRR8749028	MeJA induced 9h	1.013
SRR8749029	MeJA induced 9h	0.312
SRR8749030	Uninduced	0.540
SRR8749031	Uninduced	0.217
SRR8749032	Uninduced	0.506

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.947
SRR8400027	Control - Root	6.541