Gene detail information of Glyur001992s00038065 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01650.2 | 5.00E-49 | Tautomerase/MIF superfamily protein |
| NR | KEH28840.1 | 7.49E-68 | macrophage migration inhibition factor-like protein [Medicago truncatula] |
| COG | YP_001017772.1 | 9.00E-18 | ATLS1-like light-inducible protein [Prochlorococcus marinus str. MIT 9303] |
| trEMBL | tr|A0A072USK6|A0A072USK6_MEDTR | 3.00E-68 | Macrophage migration inhibition factor-like protein {ECO:0000313|EMBL:KEH28840.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01992 | 15006 | 18897 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001992s00038065.1 | PF01187.13 | MIF | 2 | 105 | 6.10E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 88.034 |
| SRR1783600 | control | 88.589 |
| SRR1783602 | moderate drought stress | 107.566 |
| SRR1811619 | moderate drought stress | 102.934 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 137.094 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 130.664 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 100.706 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 95.479 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 121.069 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 112.263 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 129.702 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 133.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 213.110 |
| SRR2868004 | Drought Stress (root) | 228.782 |
| SRR2967015 | Control (root) | 201.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 313.925 |
| SRR9715740 | Leaf | 406.542 |
| SRR9715741 | Leaf | 378.348 |
| SRR9715739 | Root | 261.074 |
| SRR9715742 | Root | 228.163 |
| SRR9715743 | Root | 220.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 165.463 |
| SRR8749028 | MeJA induced 9h | 83.813 |
| SRR8749029 | MeJA induced 9h | 117.799 |
| SRR8749030 | Uninduced | 46.123 |
| SRR8749031 | Uninduced | 41.702 |
| SRR8749032 | Uninduced | 62.254 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 249.707 |
| SRR8400027 | Control - Root | 241.520 |