Gene detail information of Glyur001991s00035739 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60810.1 | 8.00E-25 | |
| NR | AFK34106.1 | 1.81E-52 | unknown [Lotus japonicus] |
| trEMBL | tr|I3S1G4|I3S1G4_LOTJA | 7.00E-53 | Uncharacterized protein {ECO:0000313|EMBL:AFK34106.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01991 | 19660 | 20322 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 29.631 |
| SRR1783600 | control | 32.196 |
| SRR1783602 | moderate drought stress | 29.167 |
| SRR1811619 | moderate drought stress | 29.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.808 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.931 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.129 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.032 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.828 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.849 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 33.759 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 32.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 81.705 |
| SRR2868004 | Drought Stress (root) | 115.854 |
| SRR2967015 | Control (root) | 76.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 48.901 |
| SRR9715740 | Leaf | 27.138 |
| SRR9715741 | Leaf | 47.558 |
| SRR9715739 | Root | 5.969 |
| SRR9715742 | Root | 11.954 |
| SRR9715743 | Root | 9.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 53.698 |
| SRR8749028 | MeJA induced 9h | 59.510 |
| SRR8749029 | MeJA induced 9h | 47.869 |
| SRR8749030 | Uninduced | 257.284 |
| SRR8749031 | Uninduced | 216.699 |
| SRR8749032 | Uninduced | 170.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 51.719 |
| SRR8400027 | Control - Root | 24.894 |