Gene detail information of Glyur001991s00035738 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60810.1 | 4.00E-36 | |
| NR | KHN40149.1 | 9.43E-55 | hypothetical protein glysoja_028770 [Glycine soja] |
| COG | YP_007102542.1 | 9.00E-16 | hypothetical protein Pse7367_1838 [Pseudanabaena sp. PCC 7367] |
| trEMBL | tr|K7K3U0|K7K3U0_SOYBN | 4.00E-55 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G34380.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01991 | 17222 | 19259 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001991s00035738.1 | PF07386.6 | DUF1499 | 1 | 83 | 4.40E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.523 |
| SRR1783600 | control | 6.654 |
| SRR1783602 | moderate drought stress | 6.499 |
| SRR1811619 | moderate drought stress | 6.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.373 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.720 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.101 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.302 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.060 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.577 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.565 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.152 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 56.690 |
| SRR2868004 | Drought Stress (root) | 74.001 |
| SRR2967015 | Control (root) | 54.120 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 50.930 |
| SRR9715740 | Leaf | 18.108 |
| SRR9715741 | Leaf | 35.277 |
| SRR9715739 | Root | 3.964 |
| SRR9715742 | Root | 7.262 |
| SRR9715743 | Root | 7.574 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 46.614 |
| SRR8749028 | MeJA induced 9h | 29.125 |
| SRR8749029 | MeJA induced 9h | 47.306 |
| SRR8749030 | Uninduced | 355.874 |
| SRR8749031 | Uninduced | 205.654 |
| SRR8749032 | Uninduced | 215.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.234 |
| SRR8400027 | Control - Root | 14.323 |