Gene detail information of Glyur001990s00033283 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004489113.1 | 2.71E-30 | PREDICTED: 60S ribosomal protein L2, mitochondrial-like [Cicer arietinum] |
| Swissprot | tr|P93311|RM02_ARATH | 4.00E-12 | 60S ribosomal protein L2, mitochondrial |
| trEMBL | tr|K7LAX9|K7LAX9_SOYBN | 7.00E-24 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G48050.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01990 | 18993 | 25057 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.418 |
| SRR1783600 | control | 2.210 |
| SRR1783602 | moderate drought stress | 2.246 |
| SRR1811619 | moderate drought stress | 2.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.142 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.284 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.596 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.696 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.649 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.821 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.970 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.087 |
| SRR2868004 | Drought Stress (root) | 0.590 |
| SRR2967015 | Control (root) | 1.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.391 |
| SRR9715740 | Leaf | 0.196 |
| SRR9715741 | Leaf | 0.264 |
| SRR9715739 | Root | 0.202 |
| SRR9715742 | Root | 0.545 |
| SRR9715743 | Root | 0.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.266 |
| SRR8749028 | MeJA induced 9h | 1.687 |
| SRR8749029 | MeJA induced 9h | 0.965 |
| SRR8749030 | Uninduced | 0.763 |
| SRR8749031 | Uninduced | 0.439 |
| SRR8749032 | Uninduced | 1.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.602 |
| SRR8400027 | Control - Root | 0.570 |