Gene detail information of Glyur001990s00033282 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G56180.1 | 3.00E-148 | |
| NR | XP_004488764.1 | 0 | PREDICTED: uncharacterized protein LOC101507232 isoform X1 [Cicer arietinum] |
| COG | YP_723906.1 | 8.00E-29 | hypothetical protein Tery_4446 [Trichodesmium erythraeum IMS101] |
| trEMBL | tr|G7IQY1|G7IQY1_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK46324.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01990 | 12227 | 17747 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.140 |
| SRR1783600 | control | 2.122 |
| SRR1783602 | moderate drought stress | 2.574 |
| SRR1811619 | moderate drought stress | 2.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.425 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.290 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.789 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.814 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.745 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.603 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.708 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.803 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.580 |
| SRR2868004 | Drought Stress (root) | 8.761 |
| SRR2967015 | Control (root) | 8.698 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.037 |
| SRR9715740 | Leaf | 32.348 |
| SRR9715741 | Leaf | 21.546 |
| SRR9715739 | Root | 4.375 |
| SRR9715742 | Root | 2.711 |
| SRR9715743 | Root | 2.969 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.061 |
| SRR8749028 | MeJA induced 9h | 5.087 |
| SRR8749029 | MeJA induced 9h | 3.514 |
| SRR8749030 | Uninduced | 1.663 |
| SRR8749031 | Uninduced | 0.726 |
| SRR8749032 | Uninduced | 1.572 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.281 |
| SRR8400027 | Control - Root | 8.209 |