Gene detail information of Glyur001985s00035998 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14240.1 | 3.00E-14 | CBS domain-containing protein with a domain of unknown function (DUF21) |
| NR | XP_011013038.1 | 4.77E-14 | PREDICTED: DUF21 domain-containing protein At4g14240-like isoform X3 [Populus euphratica] |
| Swissprot | tr|Q67XQ0|Y4424_ARATH | 1.00E-15 | DUF21 domain-containing protein At4g14240 |
| trEMBL | tr|M1BU49|M1BU49_SOLTU | 2.00E-14 | Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400052921} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01985 | 32934 | 43986 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001985s00035998.1 | PF00996.13 | GDI | 90 | 113 | 2.10E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.592 |
| SRR1783600 | control | 5.598 |
| SRR1783602 | moderate drought stress | 5.321 |
| SRR1811619 | moderate drought stress | 5.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.244 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.555 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 42.633 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 39.815 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.908 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.342 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.619 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.518 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.788 |
| SRR2868004 | Drought Stress (root) | 31.808 |
| SRR2967015 | Control (root) | 31.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.003 |
| SRR9715740 | Leaf | 1.719 |
| SRR9715741 | Leaf | 1.282 |
| SRR9715739 | Root | 0.165 |
| SRR9715742 | Root | 0.592 |
| SRR9715743 | Root | 0.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.848 |
| SRR8749028 | MeJA induced 9h | 12.142 |
| SRR8749029 | MeJA induced 9h | 12.085 |
| SRR8749030 | Uninduced | 8.896 |
| SRR8749031 | Uninduced | 6.458 |
| SRR8749032 | Uninduced | 10.639 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.187 |
| SRR8400027 | Control - Root | 5.685 |