Gene detail

Gene detail information of Glyur001983s00033208.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G18670.1	0	Protein kinase superfamily protein
NR	XP_003527095.1	0	PREDICTED: probable serine/threonine-protein kinase At1g54610-like [Glycine max]
COG	YP_003371239.1	5.00E-24	serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Swissprot	tr\|F4I114\|Y1960_ARATH	0	Probable serine/threonine-protein kinase At1g09600
trEMBL	tr\|I1KCW0\|I1KCW0_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G21210.1}

Sequence

Transcript Sequence

>Glyur001983s00033208.1
CAGAGTCACACTCATACACAGACATAGTTTTATTCCGTTAGACCAATTATATAAATCTCTCCGTTGATTTCGCTCTTCTTATTTTATTCTATTTTATTTTTCAAATAGTTTTTTTAATTTGACAATCCTCCCTCCTCCTAGACCTCATTAAACAAACAAAAGCCCTTTTCGCCCACAGACCACAGTCTCTCCCGCAATTATCGCAACAGCGAAAACCAAACAGAGAACAACAACACACANACACTGAGANACAGAAAGCGAAGTAGACCAGTGCGACATTCCGTTTCTGCGTTTCNTTTGACGAATCGTCGCTGATTGAATCGCTTNCTGGTATAATAAAACGCAGAGCTCACAGAACTCGGACTCTGTCGTCGTCGTCGTCGTNTGAATTGGGCCGCGGGGTCCGACCCGAATTTCGATGGGGTGTGTGAGTTCGAAGCAGGCGGTGTCGGTGACTCCCGCGATCGACCACTCGGGCGCGTTCGGGAGGATAGTAGCGGTTGAGTCGGACAGGAAGAGGGGCGAGTCGGGGAGGGCGAGTCAGAGCGAGGTGGGCNAGTCGGGGAGAGCGAGTTCGAACGGGGTGGGTGGTTGCGAGTCACTGAGCTTCAGGTTGGGGAACATCCACAAGTACGTGCAGGGTGANCACGTGGCAGCCGGTTGGCCCGCGTGGCTCAGCGCCGTCGCCGGCGAAGCCATTCACGGCTGGGTTCCTCTCCGCGCCGATGCCTTTGAGAAACTCGAGAAGATTGGACAGGGGACATATAGCAGTGTTTTTCGGGCGAAGGAGATCGAGACGGGGAAGATAGTGGCACTGAAGAAGGTGCGGTTTGACAATTTCGAACCGGAGAGTGTGAGGTTCATGGCGCGGGAGATAATGATTCTGAGGAGGCTCGATCATCCCAACATTGTGAAACTTGAGGGGTTGATTACTTCCAGATTGTCGTGTAGCATATACCTTGTGTTCGAGTACATGGAGCATGACATTACAGGGCTCTTGTCCTCTCCTAATATCAAGTTCACTGAACCACAGATTAAGTGCTATCTGAAGCAGTTGTTATCGGGTCTCGAGCATTGTCACTTGCGGGGTGTGATGCACCGGGACATCAAAGGATCGAATCTTCTGGTGAATAATGAAGGGATATTGAAGGTGGCGGATTTTGGATTGGCGAACTTCACCTGTTCTGGGCACAAGCAGCCCCTCACTAGTCGCGTTGTCACCTTGTGGTACCGTCCACCGGAGCTTTTGCTTGGTTCGACGGATTACGGTCCATCTGTGGATCTCTGGAGTGTTGGCTGCGTGTTTGCCGAGCTACTTGTTGGGAAGCCTATACTGCAGGGGAGAACTGAGGTTGAACAACTGCACAAAATTTTCAAGCTTTGTGGCTCCCCACCCGATGAATACTGGAAAAAGTCTAGACTTCCTCATGCAACCTTGTTTAAGCCACAGCAACCATATGATAGTTGCCTCCGAGAGTCCTTTAAAGATTTGCCTCCGACCAGTGTAAATCTGCTACAAACTCTTCTTTCTGTTGAACCGTACAAACGTGGGACTGCCACATCTGCTCTCTCATCAGAGTATTTCAAAACAAAACCTTATGCGTGTGACCCATCAAGCTTGCCGAAATACCCACCTAGCAAGGAAATTGATGCAAAGCACAGGGAGGAGTCAAGGAAAAAGATTAGTGGACGAGTTCGTGGAACTGAAACAAGAAAACCATCCAGAAAGCCACTAGGATTCAGTAAACTAGCCCCAGCAGAGGACCCAGCAAATCAAACTAAGACTTCCCACAGGGTCAATGGTAGATCATTCCGCATCCTTAAAGAAGAGAAGAGTAACCTAGGTGAGGAGGCACAAAAGCCATCTAGTGGTAGACCTGAAGATGCTTCTCATATGAAGAATGCATCTCAAGGAGATATTCCCTTTTCTGGGCCATTACAAGTTTCAACATCAAGTGGCTTTGCATGGGCAAAAAGCCGTAAAGAGGACACTTCAATTCGATCCCATTGTCGAACTATTTCTAGAGGACATATTTTCAATCTCTTAGAACCTTCTACATTAAATTCGAGGAATAATTTGGACACTACGGACCAGGAAAACAAGGAGATTTGTGGGGGACGCACCAACTCTAGGGGCAATGACCTAAATGAAATTTCTAAGCTTTCAATGCAGAATCAGTGGAGTAGGTTTGATCGCCCAGATTCATTTGATGCTTCTGATGAGTACCACTCACAAGAACTGTCCATGGCACTTTACCGTAAAGAAGATTCAGTATCCAAGAGAAGTAACATGAGTTTTCAGGATCAAGGAGAAAAGGTTGAATTTTCAGGGCCCCTACTGTCTCAAATGGACACAGTTGACGAGCTATTAGAAAGGCATGAGCGTCATATCCGGCGAACTGTCCGAAGATCATGGTTTCAGAGAGGTAAGAAGCATGGGAAGTGAATCCAGTAATTGCAAGGGTATATTTACTCTGGAAATTTGTAGTCCTTGAACATCGTATCAAAATGATACAGGAAGTCCTTCTGATAAGGCCATCTCCATTCTTTAAGCTCACTGCTATGAGCTGCAAGTGAACATCAGAATCATACAAAGATATTGTTACCTGGAAGCTCGTAAAACTCAACAATTTGAGGAACATATCACTTTCAGCTTTCATTTTATAGAAATCTGAAGGCCAGCCCGAAGAAAAGAATAAAGGTTTTGGAGTTCCCTGTTTTGGTCAATTATAGATTTATAGATAAGAATTTGATTATGTATGGTNTAAACTCCTCTCACTTCTTGCCGTTGCTAATTGTTATCTGCTTGCAAGGCTCATACGGCAACTGTAAATATGTCACCTACATTATTCAATGTATTTTAGGCTTTAAAGG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01983	36504	41712	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001983s00033208.1	PF00069.20	Pkinase	105	389	3.70E-66

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	15.142
SRR1783600	control	15.366
SRR1783602	moderate drought stress	7.383
SRR1811619	moderate drought stress	7.489

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	19.218
DRR006520	Root Summer glycyrrhizin high producing strain	19.220
DRR006521	Root Winter glycyrrhizin high producing strain	3.874
DRR006522	Root Winter glycyrrhizin high producing strain	3.694
DRR006523	Root Summer glycyrrhizin low producing strain	17.580
DRR006524	Root Summer glycyrrhizin low producing strain	17.591
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.916

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	15.717
SRR2868004	Drought Stress (root)	14.366
SRR2967015	Control (root)	14.235

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.727
SRR9715740	Leaf	2.371
SRR9715741	Leaf	3.283
SRR9715739	Root	3.466
SRR9715742	Root	12.447
SRR9715743	Root	10.641

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	15.377
SRR8749028	MeJA induced 9h	22.231
SRR8749029	MeJA induced 9h	5.917
SRR8749030	Uninduced	4.306
SRR8749031	Uninduced	1.542
SRR8749032	Uninduced	1.447

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	26.283
SRR8400027	Control - Root	26.070