Gene detail

Gene detail information of Glyur001983s00033206

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G61290.1	2.00E-174	Flavin-binding monooxygenase family protein
NR	KHN06897.1	0	Flavin-containing monooxygenase FMO GS-OX-like 9 [Glycine soja]
COG	NP_924910.1	7.00E-44	dimethylaniline monoxygenase [Gloeobacter violaceus PCC 7421]
Swissprot	tr\|Q9FLK4\|GSXL8_ARATH	0	Flavin-containing monooxygenase FMO GS-OX-like 8
trEMBL	tr\|V7CHR8\|V7CHR8_PHAVU	0	Flavin-containing monooxygenase {ECO:0000256\|RuleBase:RU361177}

Sequence

Transcript Sequence

>Glyur001983s00033206.1
CCACCTAATAAGAAAAAAGAAAAACCCCTCTTGCTTTAGCATTCTCACCTATTACCTCTATCCCTTAATTAACCTTTCTGCCACACTATATCCAGCATATTTAATTTGTTTGTCCAAAAACCATGGTTTCCGAGACAAACCAACATTCCAAGAATGTGTGTGTAATCGGAGCTGGACCATCAGGGCTGGTGGCAGCAAGGGAGTTGAGAAAAGAAGGTCATAAGGTGGTTGTGTTAGAGCAGAATTATGATGTTGGAGGGCAATGGTTATATGAACCAAATGTACAAGGGGAGGACCCTTTAGGAAAAAACCATTTCTTAAAGGTGCATAGCAGTGTCTATGATTCTTTAAGGCTGGCATCTCCAAGGGAGATCATGGGGTTCTCAGATTTCCCATTTTTGGTCAGGAAAGGTAGAGACATGAGGAGGTTTCCTAGCCATAGAGAGCTACTCCAGTACCTGAAGGACTTCTGTGATTGGTTTGGGTTGAGGGAGATGATAAGGTTCAATACAAGGGTGGATTATGTGGGAATGTTAGACTATGGTGTTGGTGTCTGTAGTAAAGACTTGAAGTGGGTTGTTAGAAGCATAGAGAAGAAGAGTGAGAAGGTGGTGGAAGAGGTGTTTGATGCAGTGGTTGTGGCCTCTGGTCATTACTCTCAACCAAGATTGCCCTCCATCAAAGGAATGGATACATGGAAAAGGAAACAAATGCATAGTCACATTTACAGGACCCCAGAACCATTCCGCAATGAGGTTGTGGTGGTGGTTGGAAATTCCCAAAGTGGACAAGATATATCAATAGAGATGGCGGAAGTAGCCAAGGAAGTCCATATGAGTTCGAGATCTCTTAAAATCTCTGAGGGTTTATCTAAAGTCATATCCAAACATGAGAACTTTCATCTTCACCCACAGATAGATACCCTTGAAGAGGACGGGAGGGTCACTTTCGTGGATGGTTCTTGCATTCTTGCAGACTCCATTTTGTACTGCACAGGGTACTCCTATGCATTCCCCTTTCTTGACACCAAAGGAATGGTGGTTATAGATGATAACAGAGTGGGCCCTTTGTATGAGCACACTTTCCCCCCATCACTTGCTCCATCCCTTTCTTTTATAGGCATCCCTAGAAAGATCATAGGATTCCCTTTCTTTGAGTCCCAAGCAATATGGATAGCCCAACTGCTTTCAGGGAAAAAAGCATTGCCATCATGGGAGGAAATGATGAAATCCATCAAGGAGTTCTACCATTCAAGAGAAGCAGCAGGCATTCCTAAGCATTGTACCCATGATATCGCAGAATTTGAGTACTGTGACAAATACGGAGATAATGTGGGATTCCCACGTTTAGAAGAATGGAGAAAAGGGCTTTGCATAACAGCCTTAGTTAGGGCTGATATCGACTTGGAGACATATCGAGATTCGTGGGATGATGATCAGCAGCTGCTCCAACAGGCCCTTCAAAGTCCTCACTTCACTCAACTTGGACTTGAAGATTCTCCTCCTCAGTCTAAAGTCTAAACCATAAACAAGAATAAAAAAAATGGTTATGTTATTTCTATTTTTAAAAGATTGGAAAGGGACAAAGGGGACATGAGAGGAATCACGGTTGAAAGAGTGTTGTGATATATATAGTTTTTGTGTTTTGTTGCGATTTTTGGTTTTTATAATGTTAAGTAATTAATGGGTTGTTGTGGGTAATGAGGTTATTAAGGGGCAGTGTGCACGAAACGAAACAGAGAGTTGAGTGGGGAATTTCATCGAACAGTTGGAGGAGACAATTGCGCGTTTAACGGCATATGAATCGCTACAAAAGGAGACTAAAGTGGAAAAGGCTCACTCACCTATATTACTATAGCAGTTGAAAATGTTTGGAACTGAGTCAATCCATGATATTTGCGCGATGCGACACACGTTTTGGCGCTTTGCTCTGTTTTGTTGTCGACTTGTCTGTATGGTGTAGCAGCAGTTATTGTAAAATATATTTTTTTTAGATTTAAATCTGGTTTTTGTCCTTCGTTTTTAGTAATTTTTCGTTTTTAGTACTTCAAAAATAAAATACATTTTTTTAGTTTTTTATTTTTAAAAATATGTCATTTTTAGTCCTTAAGGTCATATTTTAAATTTAAAAAATATTTTCTAAATTTATACTTTAACCCCTCCCAAAGCATGATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01983	18603	22510	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0004499 N,N-dimethylaniline monooxygenase activity

GO:0050660 flavin adenine dinucleotide binding

GO:0050661 NADP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001983s00033206.1	PF00743.14	FMO-like	10	242	1.60E-34
Glyur001983s00033206.1	PF00743.14	FMO-like	262	387	2.00E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.187
SRR1783600	control	2.205
SRR1783602	moderate drought stress	1.084
SRR1811619	moderate drought stress	1.141

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.683
DRR006520	Root Summer glycyrrhizin high producing strain	10.212
DRR006521	Root Winter glycyrrhizin high producing strain	0.342
DRR006522	Root Winter glycyrrhizin high producing strain	0.262
DRR006523	Root Summer glycyrrhizin low producing strain	3.757
DRR006524	Root Summer glycyrrhizin low producing strain	3.852
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.611
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.512

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	120.544
SRR2868004	Drought Stress (root)	94.192
SRR2967015	Control (root)	110.886

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.019
SRR9715740	Leaf	1.828
SRR9715741	Leaf	0.365
SRR9715739	Root	2.895
SRR9715742	Root	8.319
SRR9715743	Root	6.954

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.017
SRR8749028	MeJA induced 9h	0.379
SRR8749029	MeJA induced 9h	0.539
SRR8749030	Uninduced	0.294
SRR8749031	Uninduced	0.276
SRR8749032	Uninduced	3.649

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	44.332
SRR8400027	Control - Root	52.374