Gene detail information of Glyur001983s00033205.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G61270.1 | 2.00E-31 | phytochrome-interacting factor7 |
| NR | XP_006581990.1 | 6.90E-135 | PREDICTED: transcription factor UNE10-like isoform X1 [Glycine max] |
| Swissprot | tr|Q8GZ38|UNE10_ARATH | 7.00E-45 | Transcription factor UNE10 |
| trEMBL | tr|K7KW24|K7KW24_SOYBN | 3.00E-135 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G21495.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01983 | 7570 | 12119 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001983s00033205.1 | PF00010.21 | HLH | 195 | 240 | 4.20E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.362 |
| SRR1783600 | control | 0.406 |
| SRR1783602 | moderate drought stress | 0.193 |
| SRR1811619 | moderate drought stress | 0.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.077 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.247 |
| SRR2967015 | Control (root) | 0.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.371 |
| SRR9715740 | Leaf | 3.865 |
| SRR9715741 | Leaf | 2.276 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.177 |
| SRR9715743 | Root | 0.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.049 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.046 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.014 |
| SRR8400027 | Control - Root | 0.025 |