Gene detail information of Glyur001983s00033202 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN06904.1 | 1.22E-13 | Zinc finger Ran-binding domain-containing protein 3 [Glycine soja] |
| trEMBL | tr|K7KW28|K7KW28_SOYBN | 5.00E-14 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G21530.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01983 | 1434 | 2754 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.567 |
| SRR1783600 | control | 1.709 |
| SRR1783602 | moderate drought stress | 2.207 |
| SRR1811619 | moderate drought stress | 1.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.045 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.294 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.473 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.757 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.077 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.444 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.840 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.529 |
| SRR2868004 | Drought Stress (root) | 2.445 |
| SRR2967015 | Control (root) | 2.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.125 |
| SRR9715740 | Leaf | 2.712 |
| SRR9715741 | Leaf | 3.169 |
| SRR9715739 | Root | 0.204 |
| SRR9715742 | Root | 1.266 |
| SRR9715743 | Root | 1.518 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.417 |
| SRR8749028 | MeJA induced 9h | 3.240 |
| SRR8749029 | MeJA induced 9h | 3.640 |
| SRR8749030 | Uninduced | 1.759 |
| SRR8749031 | Uninduced | 0.287 |
| SRR8749032 | Uninduced | 0.973 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.612 |
| SRR8400027 | Control - Root | 3.457 |