Gene detail information of Glyur001982s00031840 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16175.1 | 6.00E-20 | Thioesterase superfamily protein |
| NR | AFK41259.1 | 1.27E-71 | unknown [Lotus japonicus] |
| COG | YP_003953140.1 | 2.00E-07 | hypothetical protein STAUR_3523 [Stigmatella aurantiaca DW4/3-1] |
| trEMBL | tr|I3SLW7|I3SLW7_LOTJA | 5.00E-72 | Uncharacterized protein {ECO:0000313|EMBL:AFK41259.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01982 | 14168 | 15039 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001982s00031840.1 | PF03061.17 | 4HBT | 59 | 132 | 0.00017 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.795 |
| SRR1783600 | control | 2.762 |
| SRR1783602 | moderate drought stress | 1.469 |
| SRR1811619 | moderate drought stress | 1.490 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.916 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.908 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.195 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.504 |
| SRR2868004 | Drought Stress (root) | 10.651 |
| SRR2967015 | Control (root) | 9.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.141 |
| SRR9715740 | Leaf | 1.240 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 2.165 |
| SRR9715742 | Root | 1.345 |
| SRR9715743 | Root | 3.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.177 |
| SRR8749028 | MeJA induced 9h | 43.193 |
| SRR8749029 | MeJA induced 9h | 39.296 |
| SRR8749030 | Uninduced | 50.777 |
| SRR8749031 | Uninduced | 42.139 |
| SRR8749032 | Uninduced | 22.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.480 |
| SRR8400027 | Control - Root | 9.978 |