Gene detail information of Glyur001981s00035956 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004493112.1 | 5.78E-89 | PREDICTED: uncharacterized protein LOC101491949 [Cicer arietinum] |
| trEMBL | tr|V7C338|V7C338_PHAVU | 2.00E-78 | Uncharacterized protein {ECO:0000313|EMBL:ESW23685.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01981 | 39866 | 40567 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001981s00035956.1 | PF05553.6 | DUF761 | 203 | 233 | 1.60E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.777 |
| SRR1783600 | control | 5.861 |
| SRR1783602 | moderate drought stress | 6.572 |
| SRR1811619 | moderate drought stress | 6.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.155 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.153 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.184 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.408 |
| SRR2868004 | Drought Stress (root) | 9.532 |
| SRR2967015 | Control (root) | 13.655 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.209 |
| SRR9715740 | Leaf | 0.537 |
| SRR9715741 | Leaf | 1.606 |
| SRR9715739 | Root | 24.731 |
| SRR9715742 | Root | 34.693 |
| SRR9715743 | Root | 27.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 73.582 |
| SRR8749028 | MeJA induced 9h | 122.175 |
| SRR8749029 | MeJA induced 9h | 215.976 |
| SRR8749030 | Uninduced | 159.191 |
| SRR8749031 | Uninduced | 71.937 |
| SRR8749032 | Uninduced | 65.860 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.789 |
| SRR8400027 | Control - Root | 16.524 |