Gene detail information of Glyur001981s00035955 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16510.1 | 2.00E-10 | Calcium-dependent lipid-binding (CaLB domain) family protein |
| NR | XP_004493111.1 | 1.83E-98 | PREDICTED: uncharacterized protein LOC101491643 [Cicer arietinum] |
| trEMBL | tr|K7MF71|K7MF71_SOYBN | 9.00E-89 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G05000.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01981 | 36470 | 37327 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.770 |
| SRR1783600 | control | 11.579 |
| SRR1783602 | moderate drought stress | 7.756 |
| SRR1811619 | moderate drought stress | 7.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 153.499 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 149.862 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.836 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.225 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 107.700 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 105.743 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 95.011 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 94.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.146 |
| SRR2868004 | Drought Stress (root) | 10.250 |
| SRR2967015 | Control (root) | 50.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 197.029 |
| SRR9715740 | Leaf | 268.563 |
| SRR9715741 | Leaf | 186.888 |
| SRR9715739 | Root | 504.703 |
| SRR9715742 | Root | 323.553 |
| SRR9715743 | Root | 344.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 214.848 |
| SRR8749028 | MeJA induced 9h | 189.973 |
| SRR8749029 | MeJA induced 9h | 205.462 |
| SRR8749030 | Uninduced | 142.765 |
| SRR8749031 | Uninduced | 70.144 |
| SRR8749032 | Uninduced | 167.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.484 |
| SRR8400027 | Control - Root | 52.785 |