Gene detail information of Glyur001974s00028596 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G26744.4 | 7.00E-53 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | KDP41846.1 | 2.93E-78 | hypothetical protein JCGZ_26864 [Jatropha curcas] |
| Swissprot | tr|Q9LSE2|ICE1_ARATH | 2.00E-72 | Transcription factor ICE1 |
| trEMBL | tr|A0A067L072|A0A067L072_JATCU | 1.00E-78 | Uncharacterized protein {ECO:0000313|EMBL:KDP41846.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01974 | 34709 | 38949 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.147 |
| SRR1783600 | control | 1.904 |
| SRR1783602 | moderate drought stress | 0.813 |
| SRR1811619 | moderate drought stress | 0.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.887 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.163 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.610 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.592 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.880 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.253 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.489 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.170 |
| SRR2868004 | Drought Stress (root) | 0.948 |
| SRR2967015 | Control (root) | 1.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.435 |
| SRR9715740 | Leaf | 3.280 |
| SRR9715741 | Leaf | 1.493 |
| SRR9715739 | Root | 3.440 |
| SRR9715742 | Root | 1.820 |
| SRR9715743 | Root | 2.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.511 |
| SRR8749028 | MeJA induced 9h | 0.335 |
| SRR8749029 | MeJA induced 9h | 0.221 |
| SRR8749030 | Uninduced | 0.149 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.526 |
| SRR8400027 | Control - Root | 4.447 |