Gene detail information of Glyur001974s00028591 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G26150.1 | 1.00E-43 | heat shock transcription factor A2 |
| NR | XP_004507947.1 | 2.99E-161 | PREDICTED: heat shock factor protein HSF30-like [Cicer arietinum] |
| Swissprot | tr|P41152|HSF30_SOLPE | 5.00E-50 | Heat shock factor protein HSF30 |
| trEMBL | tr|I1LY11|I1LY11_SOYBN | 3.00E-156 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G16510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01974 | 742 | 3205 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.969 |
| SRR1783600 | control | 4.811 |
| SRR1783602 | moderate drought stress | 9.987 |
| SRR1811619 | moderate drought stress | 9.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.742 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.752 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.320 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.099 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.083 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.141 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.533 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.753 |
| SRR2868004 | Drought Stress (root) | 14.126 |
| SRR2967015 | Control (root) | 17.860 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.815 |
| SRR9715740 | Leaf | 7.181 |
| SRR9715741 | Leaf | 4.137 |
| SRR9715739 | Root | 7.174 |
| SRR9715742 | Root | 12.898 |
| SRR9715743 | Root | 12.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.058 |
| SRR8749028 | MeJA induced 9h | 19.827 |
| SRR8749029 | MeJA induced 9h | 2.619 |
| SRR8749030 | Uninduced | 4.432 |
| SRR8749031 | Uninduced | 0.237 |
| SRR8749032 | Uninduced | 0.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.912 |
| SRR8400027 | Control - Root | 17.175 |