Gene detail information of Glyur001973s00030839 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004511793.1 | 2.79E-09 | PREDICTED: transcription factor bHLH18-like [Cicer arietinum] |
| trEMBL | tr|C0JP22|C0JP22_LOTJA | 2.00E-08 | Putative basic helix-loop-helix protein BHLH17 {ECO:0000313|EMBL:ACN21641.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01973 | 38940 | 40087 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.571 |
| SRR1783600 | control | 1.516 |
| SRR1783602 | moderate drought stress | 1.799 |
| SRR1811619 | moderate drought stress | 1.737 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.985 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.457 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.452 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.593 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.165 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.562 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.033 |
| SRR2868004 | Drought Stress (root) | 0.042 |
| SRR2967015 | Control (root) | 0.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.112 |
| SRR9715740 | Leaf | 3.232 |
| SRR9715741 | Leaf | 4.860 |
| SRR9715739 | Root | 0.104 |
| SRR9715742 | Root | 1.607 |
| SRR9715743 | Root | 1.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.582 |
| SRR8400027 | Control - Root | 4.813 |