Gene detail information of Glyur001973s00030838 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G47820.2 | 2.00E-07 | |
| NR | KEH21546.1 | 8.56E-28 | hypothetical protein MTR_7g007290 [Medicago truncatula] |
| trEMBL | tr|A0A072TWH2|A0A072TWH2_MEDTR | 3.00E-28 | Uncharacterized protein {ECO:0000313|EMBL:KEH21546.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01973 | 36954 | 40227 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.170 |
| SRR1783600 | control | 6.351 |
| SRR1783602 | moderate drought stress | 7.053 |
| SRR1811619 | moderate drought stress | 6.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.512 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.739 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.026 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.643 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.584 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.219 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.717 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.766 |
| SRR2868004 | Drought Stress (root) | 12.085 |
| SRR2967015 | Control (root) | 11.566 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.658 |
| SRR9715740 | Leaf | 13.111 |
| SRR9715741 | Leaf | 10.688 |
| SRR9715739 | Root | 1.765 |
| SRR9715742 | Root | 2.443 |
| SRR9715743 | Root | 2.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.925 |
| SRR8749028 | MeJA induced 9h | 9.626 |
| SRR8749029 | MeJA induced 9h | 12.514 |
| SRR8749030 | Uninduced | 4.969 |
| SRR8749031 | Uninduced | 2.937 |
| SRR8749032 | Uninduced | 4.897 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.169 |
| SRR8400027 | Control - Root | 14.003 |