Gene detail

Gene detail information of Glyur001960s00034841

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G14620.1	1.00E-19	cytochrome P450, family 72, subfamily A, polypeptide 8
NR	XP_004499772.1	0	PREDICTED: cytochrome P450 734A6-like isoform X1 [Cicer arietinum]
COG	YP_630524.1	1.00E-14	cytochrome P450 family protein [Myxococcus xanthus DK 1622]
Swissprot	tr\|H1A988\|C7254_GLYUR	4.00E-20	11-oxo-beta-amyrin 30-oxidase
trEMBL	tr\|K7KYE8\|K7KYE8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G46761.1}

Sequence

Transcript Sequence

>Glyur001960s00034841.1
ATGAACGACTCATCATTATGTGGTTCTGTTCCCACAACTTTCGTGGGTCTCCTTCTTCTTCATCACTCCTCTTGCAACAACACTCCTTCTCACTCTCAGCTCTTCAGGGACTTCGCCACCAGAGAATTCAACGCCTTTCTCTGGCTCTTCCTCCTTGTCATCACAACCCTCTTGCTCGTTAAGCTCTTCAATCTCTTCGCTTTGTGGCTTCGAGCTAAAACCATTCCTGGGCCTCCCTCTCCCTCTTTCCTTGGCCACTCTAAACTCCTCTCCAAAGAGAANTTCACTGATGTGTTGTCAGAATCCCATGATAAGTATGGACCAATTGTTAAGCTGTGGTTAGGTCCTACTCAGCTTCTGGTGTCAGTTAAGGACCCAGTGCTAATTCAAGAGATGCTTATAAAGGCTGAGGATAAGTTGCCTTTTACTGGAAAAGCATTTCATCTAGCCTTTGGGCAATCAAGCCTCTTTGCCCCTTCCTATGAAAAGGTCCAAAAGAGAAGGGAATTATTGGCAACAGAGTTGAATGAAAGATTGCTGAAGACTGCTGATCTGATTCCTATGAAGGTTGCAGACTTCATCATGGATAAAATAGAAAACATTAGAGTCAGAGGAAGTGTTGATTGTAGTTTGCTTTCTCAGCATATTGCTTTCACCTTAATGGGAGCCACATTCTTTGGAGATGGCTTCTTGGCCTGGCCAAAGGCTGCAATATATGAGGAACTGCTTATGATGATTGCTAAAGATGCTTGCTTTTGGGCTTCCTATAATGTTACTCCTTTCTGGAAACGAGGATTTTGGAGGTACCAATGCTTGTCTACAAAGTTGAGATGCTTAACTCAAGACGTCCTTCAACTTTGCAGAAAAAGCTGCAAGATATTAGGCCATATTGATCAAAGTGTTCATAATGAAAGTTCCAACANTGTGTTGAAATCAGGAGATGGTGCACAATACCAATCTGATGATGAGTTCCAAGATTACTATTTCTTTCGTGACCTTATTGATCATGGAAATGCTAAAGAAGAACCTTGTGGGAACATCATGCGTGTGATGTTTCATGGATGTCAAACTACAGCNGCTTTAATCGCCAATGTATTGACTAATCTTGGCATGCATCTGGAGATACAGGATAAGGTTTATTCAGAGATTAGCATGGTTGGTAGAAACCCATCAAAATATGAGCATGAAGATGTTTATAGAATGCCTTTGCTATTGGCTACAGTTTATGAATCTGNGCGCCTTCTCCCGACTGGTCCCATGCTGCAGAGGTGTTCTTTGAAACGCGACTTGAGTTTTGCAACTGGTGTAACCATACCTGCTGGAGCTGTACTGGTTGTACCTGTTCAATTGGTACAGAAGGATGACTTCAGTTGGGGGAGTGACGCAAGTGATTTTAATCCATACCGATTTCTGTCAAATGGTACAAAAGGATCAGGTTCTGAAGAACTTAATTGTGGATTCAGCTCGTTTGTACTAAATGATCCAAATGAAAATGCAGCATTTCTTCCTTTTGGATCTGGTACACGTGCTTGTGTTGGGCAGAAATTTGTTATCCAAGTTGTTGCCACATTTTTGGCATCATTGCTCAAAAAATATGAGATAAGGCTCAACTCAGGTTCAGATGATGACTCAAAACCAATATTGAAGAATCCTCTTCTTCAGCATCATCCTAATTCACCTATATTGTTTGTGACAAGGGACCAGTGAAAGGAAAGAAAAGCAAGCTTAATATACATGTAGATAAAGTTGGTTTCATAATTCAAGTCAATGATGCAGGAAAATATCTGGACCCCTTTTTTTTATATTTTTCACAGCTTATCTTTTTCCATTTTTCCAAGATGAATGGGGAAGCTCTTGTCAATTTCATGGCTCATTCTNGGAGGATGCAACTTGTGTTCCTTAACTCCACACAAGTTTTTTTCCTTCCTGTTTTTAAACATTGCCCTGGTGTTGGTGGCTTCAGGCCATGGCACATCTTTTTTGTTGGTTTTTTAAGCACTTTGGGTCTATTGCTGATATTGAGCCTTTGGTTTTCCTTCCCCTTCTCTGGATGTGGACCTCTTTCTTTTNTGATGTTATCAAAACTTTTTTTACTTCATAAAGAAGTTTGTTCTTGTATCTTGACATTGTCAGAATAAAATGTAATCGGATATATTGTTTACTGTGTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01960	23598	31360	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP72A8

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001960s00034841.1	PF00067.17	p450	76	554	2.50E-49

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.934
SRR1783600	control	11.897
SRR1783602	moderate drought stress	15.987
SRR1811619	moderate drought stress	15.885

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	16.346
DRR006520	Root Summer glycyrrhizin high producing strain	16.590
DRR006521	Root Winter glycyrrhizin high producing strain	47.890
DRR006522	Root Winter glycyrrhizin high producing strain	46.829
DRR006523	Root Summer glycyrrhizin low producing strain	7.217
DRR006524	Root Summer glycyrrhizin low producing strain	7.329
DRR006525	Leaf Summer glycyrrhizin high producing strain	14.135
DRR006526	Leaf Summer glycyrrhizin high producing strain	14.184

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	19.532
SRR2868004	Drought Stress (root)	19.979
SRR2967015	Control (root)	20.322

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.970
SRR9715740	Leaf	12.354
SRR9715741	Leaf	13.039
SRR9715739	Root	4.402
SRR9715742	Root	5.835
SRR9715743	Root	6.444

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	12.326
SRR8749028	MeJA induced 9h	18.406
SRR8749029	MeJA induced 9h	13.810
SRR8749030	Uninduced	6.221
SRR8749031	Uninduced	8.568
SRR8749032	Uninduced	8.593

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	14.654
SRR8400027	Control - Root	12.956