Gene detail information of Glyur001953s00044024 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G23950.1 | 2.00E-35 | Calcium-dependent lipid-binding (CaLB domain) family protein |
| NR | ACJ84898.1 | 1.37E-111 | unknown [Medicago truncatula] |
| trEMBL | tr|B7FJG9|B7FJG9_MEDTR | 5.00E-112 | Uncharacterized protein {ECO:0000313|EMBL:AFK45218.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01953 | 31388 | 32698 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001953s00044024.1 | PF00168.25 | C2 | 10 | 88 | 5.10E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.272 |
| SRR1783600 | control | 12.271 |
| SRR1783602 | moderate drought stress | 10.824 |
| SRR1811619 | moderate drought stress | 10.893 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.667 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.561 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.722 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.218 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 43.515 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 42.784 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.164 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.413 |
| SRR2868004 | Drought Stress (root) | 2.595 |
| SRR2967015 | Control (root) | 2.712 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 49.121 |
| SRR9715740 | Leaf | 44.248 |
| SRR9715741 | Leaf | 71.831 |
| SRR9715739 | Root | 20.331 |
| SRR9715742 | Root | 28.361 |
| SRR9715743 | Root | 23.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.502 |
| SRR8749028 | MeJA induced 9h | 5.556 |
| SRR8749029 | MeJA induced 9h | 8.443 |
| SRR8749030 | Uninduced | 2.154 |
| SRR8749031 | Uninduced | 1.207 |
| SRR8749032 | Uninduced | 5.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.521 |
| SRR8400027 | Control - Root | 8.709 |