Gene detail information of Glyur001952s00038092 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G51760.1 | 1.00E-115 | peptidase M20/M25/M40 family protein |
| NR | XP_003532037.1 | 0 | PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Glycine max] |
| COG | NP_578326.1 | 1.00E-113 | IAA-amino acid hydrolase [Pyrococcus furiosus DSM 3638] |
| Swissprot | tr|Q84XG9|ILL1_ORYSI | 2.00E-151 | IAA-amino acid hydrolase ILR1-like 1 (Precursor) |
| trEMBL | tr|I1KXL2|I1KXL2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G40270.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01952 | 20072 | 23108 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001952s00038092.1 | PF01546.23 | Peptidase_M20 | 127 | 441 | 9.30E-34 |
| Glyur001952s00038092.1 | PF07687.9 | M20_dimer | 236 | 334 | 1.70E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.955 |
| SRR1783600 | control | 4.933 |
| SRR1783602 | moderate drought stress | 9.736 |
| SRR1811619 | moderate drought stress | 9.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.125 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.922 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.593 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.502 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.665 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.708 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.764 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.515 |
| SRR2868004 | Drought Stress (root) | 8.789 |
| SRR2967015 | Control (root) | 13.878 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.213 |
| SRR9715740 | Leaf | 42.845 |
| SRR9715741 | Leaf | 28.460 |
| SRR9715739 | Root | 7.358 |
| SRR9715742 | Root | 4.089 |
| SRR9715743 | Root | 4.320 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.426 |
| SRR8749028 | MeJA induced 9h | 3.903 |
| SRR8749029 | MeJA induced 9h | 3.038 |
| SRR8749030 | Uninduced | 19.727 |
| SRR8749031 | Uninduced | 24.157 |
| SRR8749032 | Uninduced | 9.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.329 |
| SRR8400027 | Control - Root | 5.125 |