Gene detail information of Glyur001947s00035938 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15780.1 | 4.00E-138 | |
| NR | XP_007150783.1 | 0 | hypothetical protein PHAVU_005G180200g [Phaseolus vulgaris] |
| Swissprot | tr|F4I171|MD15A_ARATH | 0 | Mediator of RNA polymerase II transcription subunit 15a |
| trEMBL | tr|V7BXP9|V7BXP9_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW22777.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01947 | 26803 | 40018 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.332 |
| SRR1783600 | control | 31.359 |
| SRR1783602 | moderate drought stress | 34.038 |
| SRR1811619 | moderate drought stress | 33.835 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.680 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.468 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.165 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.259 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.688 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.479 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.529 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 32.599 |
| SRR2868004 | Drought Stress (root) | 47.324 |
| SRR2967015 | Control (root) | 43.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.110 |
| SRR9715740 | Leaf | 14.529 |
| SRR9715741 | Leaf | 19.075 |
| SRR9715739 | Root | 5.309 |
| SRR9715742 | Root | 23.456 |
| SRR9715743 | Root | 20.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 71.063 |
| SRR8749028 | MeJA induced 9h | 124.804 |
| SRR8749029 | MeJA induced 9h | 78.462 |
| SRR8749030 | Uninduced | 101.320 |
| SRR8749031 | Uninduced | 252.294 |
| SRR8749032 | Uninduced | 92.953 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.242 |
| SRR8400027 | Control - Root | 31.282 |