Gene detail information of Glyur001947s00035937 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11090.1 | 3.00E-07 | serine-rich protein-related |
| NR | XP_007150776.1 | 8.45E-21 | hypothetical protein PHAVU_005G179600g [Phaseolus vulgaris] |
| trEMBL | tr|V7C0F3|V7C0F3_PHAVU | 3.00E-21 | Uncharacterized protein {ECO:0000313|EMBL:ESW22770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01947 | 19446 | 20832 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.175 |
| SRR1783600 | control | 0.272 |
| SRR1783602 | moderate drought stress | 0.607 |
| SRR1811619 | moderate drought stress | 0.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.673 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.633 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 53.070 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 51.018 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.009 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.240 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.343 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.257 |
| SRR2868004 | Drought Stress (root) | 0.177 |
| SRR2967015 | Control (root) | 0.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.690 |
| SRR9715740 | Leaf | 0.802 |
| SRR9715741 | Leaf | 0.458 |
| SRR9715739 | Root | 0.356 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.023 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 90.586 |
| SRR8749028 | MeJA induced 9h | 149.678 |
| SRR8749029 | MeJA induced 9h | 66.995 |
| SRR8749030 | Uninduced | 18.393 |
| SRR8749031 | Uninduced | 83.114 |
| SRR8749032 | Uninduced | 190.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.883 |
| SRR8400027 | Control - Root | 0.637 |