Gene detail

Gene detail information of Glyur001947s00035935

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G80530.1	Major facilitator superfamily protein
NR	XP_004486637.1	PREDICTED: uncharacterized membrane protein YMR155W-like [Cicer arietinum]
trEMBL	tr\|M5WXP9\|M5WXP9_PRUPE	Uncharacterized protein {ECO:0000313\|EMBL:EMJ18444.1}

Sequence

Transcript Sequence

>Glyur001947s00035935.1
ATGGCCAAGCTGGTTCTGAAAGCTGGGAGCAGACCTCCATGGGTTGGTCTTGCAGCTGCAGTTTGGATCCAAATAGCTGCTGGAAATGCCTACAACTTCCCCCTCTATTCCTCTGCCCTCAAATCAGTGTTGGGTCTCAACCAACAACAGGTTACTATTCTGGGAGTGGCCAATGATGTTGGGGAGAATGTGAGTCTGCTTCCTGGTATTGCCTGTAACAAGTTCCCTCCTTGGGCTTTGCTCCTTGTTGGTGCTCTTCTTTGTTTCTTTGGTTATGGGGTTATCTGGCTTGCTCTTAGCCAAACTCTTTCTGACTTCCCCTATGTGCTGTTATGGCTCGCACTTTGTGTTGCCACTAACAGTGGTGCATGGTTTGGCACGGCTGTGCTTGTTACCAACATGAGGAACTTCCCTCTCAGTAGAGGCACCATCTCTGGCATTCTTAAAGGTTATGTGGGGATTAGTGCTGCAGTATACACATTAATATATAGCATGTTGCTCAAAGGGTCTGCTTCTAAATTGCTTCTGTTTCTAGCATTTGGAGTTTCTATTGTATGCTTAGTTATGATGTACTTCATTAGGCCTTGTACTCCTCCTTCTGGGGAAGACTCTTCAGTGCATGTCCATTTCATTTTTACACAAGCTGCAAGTGTTTTACTTGCCACCTATCTTGTTGTGACCACAATAGTAAGTGACATGGTTTCCATAAATGATGCTGTTTCCTACATCTTAGTTGCCATAATGGTTATGCTTCTATTGACTCCCCTTGCAATCCCTCTCAAAATGACTCTATTTCCGGCTAGCCGAAAGGAGAGTGTNCCACTGGTTGGTTCTTCAGATCAATTGGAACAAACAAGTCCATTGCTTACACCATCTTCATCAGCTGCATATCTTGGAAGTTTTCATGAATGTGAGGATGCTTCATCAGATGTTGAGATACTAATTGCAGAAGGGGAAGGAGCAGTGAGGAAGAAAAGGAGGCCTAAAAGGGGTGATGATTTCAAGTTCATTGAAGCTTTCATCAAGGCTGATTTCTGGCTACTTTGGTTTTCTTATTTTCTTGGGGTTGGTTCAGGAGTTACTGTTCTCAATAATTTGGCTCAAATTGGAGTTGCTTTGGGTGTAGAAGATACAACCATATTGCTCTCAGTCTTCAGCTTTTGCAATTTCATGGGTCGTCTAGGTGCTGGTGCTATCTCTGAACACTTTGTTAGGTTGATAACACTACCTAGAACATTTTGGATGACAAGTGCACAAGTANTTATGATCATAGCATTTTTCCTATATGCTTCAGCTCTAGATGGCACTCTCTATGCTGCAACAGCTTTGCTTGGGATCTGCTATGGGGTACAATACTCTACAATGGTTCCAACTGTTTCTGAGCTTTTTGGTTTGAAGCACTTTGGTGTTATTAGTAGCTTCATGATGCTTGGAAACCCAATTGGTGCCCTTCTTTTTTCTGTTTTCCTTGCTGGCAATGTGTATGATACAGAAGCTGCAAAGCAAGGAAACTCCACATGCTATGGTGCAAGTTGCTTCAGGCTCACTTTTCTGGTTTTGGCTGGTGTNTGTGGAATTGGTACCATCTTGAGCATAATTTTGACAGTTAGAATAAGACCAGTATATCAAATGCTGAACTTGTATACAAATTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01947	14478	18131	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001947s00035935.1	PF06813.8	Nodulin-like	13	260	1.00E-91

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.119
SRR1783600	control	0.107
SRR1783602	moderate drought stress	0.076
SRR1811619	moderate drought stress	0.069

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.393
DRR006520	Root Summer glycyrrhizin high producing strain	0.357
DRR006521	Root Winter glycyrrhizin high producing strain	3.731
DRR006522	Root Winter glycyrrhizin high producing strain	3.864
DRR006523	Root Summer glycyrrhizin low producing strain	0.194
DRR006524	Root Summer glycyrrhizin low producing strain	0.200
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.975
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.882

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.100
SRR2868004	Drought Stress (root)	0.078
SRR2967015	Control (root)	0.047

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.997
SRR9715740	Leaf	2.433
SRR9715741	Leaf	0.696
SRR9715739	Root	0.000
SRR9715742	Root	0.039
SRR9715743	Root	0.001

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.958
SRR8749028	MeJA induced 9h	5.128
SRR8749029	MeJA induced 9h	8.198
SRR8749030	Uninduced	2.120
SRR8749031	Uninduced	12.585
SRR8749032	Uninduced	12.153

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.518
SRR8400027	Control - Root	0.357