Gene detail information of Glyur001947s00035934 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15760.1 | 7.00E-33 | Sterile alpha motif (SAM) domain-containing protein |
| NR | NP_001239993.1 | 1.86E-65 | uncharacterized protein LOC100792385 [Glycine max] |
| trEMBL | tr|C6TNS3|C6TNS3_SOYBN | 7.00E-66 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G44460.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01947 | 12972 | 13598 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 33.865 |
| SRR1783600 | control | 34.707 |
| SRR1783602 | moderate drought stress | 21.417 |
| SRR1811619 | moderate drought stress | 20.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 41.343 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 39.876 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.271 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.251 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.684 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.828 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.305 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.632 |
| SRR2868004 | Drought Stress (root) | 11.017 |
| SRR2967015 | Control (root) | 14.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.949 |
| SRR9715740 | Leaf | 5.284 |
| SRR9715741 | Leaf | 9.176 |
| SRR9715739 | Root | 20.714 |
| SRR9715742 | Root | 39.323 |
| SRR9715743 | Root | 32.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 412.964 |
| SRR8749028 | MeJA induced 9h | 401.075 |
| SRR8749029 | MeJA induced 9h | 521.255 |
| SRR8749030 | Uninduced | 58.818 |
| SRR8749031 | Uninduced | 131.468 |
| SRR8749032 | Uninduced | 216.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 78.812 |
| SRR8400027 | Control - Root | 73.859 |