Gene detail information of Glyur001942s00042176 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006575844.1 | 1.64E-43 | PREDICTED: uncharacterized protein LOC102666246 [Glycine max] |
| trEMBL | tr|I1JEJ5|I1JEJ5_SOYBN | 6.00E-44 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G13530.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01942 | 41451 | 41753 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.140 |
| SRR1783600 | control | 1.100 |
| SRR1783602 | moderate drought stress | 0.126 |
| SRR1811619 | moderate drought stress | 0.039 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.786 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.418 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.359 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.474 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.079 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.307 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.628 |
| SRR2868004 | Drought Stress (root) | 9.418 |
| SRR2967015 | Control (root) | 11.871 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.860 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.836 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.484 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.338 |
| SRR8749028 | MeJA induced 9h | 5.309 |
| SRR8749029 | MeJA induced 9h | 14.459 |
| SRR8749030 | Uninduced | 3.075 |
| SRR8749031 | Uninduced | 2.281 |
| SRR8749032 | Uninduced | 1.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.192 |
| SRR8400027 | Control - Root | 1.346 |