Gene detail information of Glyur001938s00040636 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G54000.1 | 1.00E-13 | |
| NR | XP_004513283.1 | 5.32E-78 | PREDICTED: uncharacterized protein LOC101499135 [Cicer arietinum] |
| trEMBL | tr|I1N2P9|I1N2P9_SOYBN | 6.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G41490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01938 | 31826 | 34534 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.023 |
| SRR1783600 | control | 12.330 |
| SRR1783602 | moderate drought stress | 7.972 |
| SRR1811619 | moderate drought stress | 7.878 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.327 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.642 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.981 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.097 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 58.673 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 56.772 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.361 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.267 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.262 |
| SRR2868004 | Drought Stress (root) | 7.119 |
| SRR2967015 | Control (root) | 9.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.582 |
| SRR9715740 | Leaf | 0.478 |
| SRR9715741 | Leaf | 0.493 |
| SRR9715739 | Root | 4.417 |
| SRR9715742 | Root | 13.057 |
| SRR9715743 | Root | 10.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.215 |
| SRR8749028 | MeJA induced 9h | 12.838 |
| SRR8749029 | MeJA induced 9h | 13.449 |
| SRR8749030 | Uninduced | 2.143 |
| SRR8749031 | Uninduced | 2.263 |
| SRR8749032 | Uninduced | 2.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.671 |
| SRR8400027 | Control - Root | 19.334 |