Gene detail information of Glyur001937s00037270 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G59320.1 | 4.00E-11 | lipid transfer protein 3 |
| NR | XP_004516173.1 | 5.47E-39 | PREDICTED: non-specific lipid-transfer protein 1-like [Cicer arietinum] |
| Swissprot | tr|O23758|NLTP_CICAR | 1.00E-39 | Non-specific lipid-transfer protein (Precursor) |
| trEMBL | tr|A0A072UTH7|A0A072UTH7_MEDTR | 1.00E-38 | Non-specific lipid-transfer protein {ECO:0000256|RuleBase:RU000628} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01937 | 43996 | 47188 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001937s00037270.1 | PF00234.17 | Tryp_alpha_amyl | 29 | 86 | 1.90E-06 |
| Glyur001937s00037270.1 | PF00234.17 | Tryp_alpha_amyl | 111 | 182 | 2.00E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.085 |
| SRR1783600 | control | 0.090 |
| SRR1783602 | moderate drought stress | 0.064 |
| SRR1811619 | moderate drought stress | 0.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.084 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.138 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.065 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 344.575 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 347.877 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.621 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1832.343 |
| SRR9715740 | Leaf | 1685.911 |
| SRR9715741 | Leaf | 1070.367 |
| SRR9715739 | Root | 0.201 |
| SRR9715742 | Root | 101.325 |
| SRR9715743 | Root | 81.370 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.501 |
| SRR8400027 | Control - Root | 161.959 |