Gene detail information of Glyur001935s00034599 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52140.1 | 1.00E-19 | |
| NR | XP_007151691.1 | 2.82E-91 | hypothetical protein PHAVU_004G067900g [Phaseolus vulgaris] |
| trEMBL | tr|V7C338|V7C338_PHAVU | 1.00E-91 | Uncharacterized protein {ECO:0000313|EMBL:ESW23685.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01935 | 39683 | 40312 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001935s00034599.1 | PF05553.6 | DUF761 | 177 | 208 | 4.80E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.464 |
| SRR1783600 | control | 18.209 |
| SRR1783602 | moderate drought stress | 5.124 |
| SRR1811619 | moderate drought stress | 5.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.727 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.065 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.140 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.442 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.597 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.875 |
| SRR2868004 | Drought Stress (root) | 29.050 |
| SRR2967015 | Control (root) | 18.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.302 |
| SRR9715740 | Leaf | 3.446 |
| SRR9715741 | Leaf | 1.049 |
| SRR9715739 | Root | 15.934 |
| SRR9715742 | Root | 6.895 |
| SRR9715743 | Root | 8.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 56.410 |
| SRR8749028 | MeJA induced 9h | 270.444 |
| SRR8749029 | MeJA induced 9h | 589.787 |
| SRR8749030 | Uninduced | 37.283 |
| SRR8749031 | Uninduced | 90.770 |
| SRR8749032 | Uninduced | 125.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.995 |
| SRR8400027 | Control - Root | 4.046 |