Gene detail information of Glyur001933s00036045 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G34670.1 | 3.00E-81 | myb domain protein 93 |
| NR | XP_003527903.1 | 7.11E-170 | PREDICTED: transcription factor MYB39-like [Glycine max] |
| Swissprot | tr|Q8GWP0|MYB39_ARATH | 1.00E-74 | Transcription factor MYB39 |
| trEMBL | tr|I1K9Y8|I1K9Y8_SOYBN | 3.00E-170 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G10840.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01933 | 39499 | 40823 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001933s00036045.1 | PF00249.26 | Myb_DNA-binding | 14 | 61 | 1.80E-16 |
| Glyur001933s00036045.1 | PF00249.26 | Myb_DNA-binding | 67 | 112 | 5.90E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.341 |
| SRR1783600 | control | 14.505 |
| SRR1783602 | moderate drought stress | 12.981 |
| SRR1811619 | moderate drought stress | 10.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.062 |
| SRR2868004 | Drought Stress (root) | 16.317 |
| SRR2967015 | Control (root) | 18.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 11.788 |
| SRR9715742 | Root | 2.212 |
| SRR9715743 | Root | 4.664 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 47.878 |
| SRR8400027 | Control - Root | 41.105 |