Gene detail

Gene detail information of Glyur001931s00037072

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G20140.2	4.00E-124	SOUL heme-binding family protein
NR	XP_006582076.1	0	PREDICTED: uncharacterized protein LOC100789568 isoform X3 [Glycine max]
COG	YP_846523.1	1.00E-19	SOUL heme-binding protein [Syntrophobacter fumaroxidans MPOB]
Swissprot	tr\|Q9SR77\|HBPL1_ARATH	1.00E-15	Heme-binding-like protein At3g10130, chloroplastic (Precursor)
trEMBL	tr\|I1KDA0\|I1KDA0_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G24470.2}

Sequence

Transcript Sequence

>Glyur001931s00037072.1
TGAAAATTTGGTCCATTTAATTTATTCCTCCAACTATTTGTTAGTTATGTGGCCAGGATTCAATATTATCTTCACATTCCATGCCCATGGCCACTTCCAACCTCAACCACCAAATTTCCCGTCCATTCCCTACGGCTTGCATCAGTTCCCGGCCGCCAAGCGCCGCCGTTAACATCCAGCGGTACCCATCACACCGTAGTAAACTGTCGCTTAAAGCCGAAACCAACAACAATCGCTTCAAGTGGTGGGCCATTCAACTGAGCTTAGTGGAGCAGAGCACACCAAAACCAACGTTCAATTTGCAGCAACTCGTGAGCTTTCTCTATGACGATCTTCCACACCTCTTCGATGACCAGGGTATTGATAAAAATGCCTATGACGAGCGTGTCTTCTTTCGAGACCCAATCACAAAGCACGACGACTTGAGTGGTTACCTTTTCAACATTGCTCTTCTCAAGACACTCTTTAGTCCTCAGTTTCAGTTGCATTGGGTCAAACCGACAGGACCTTATGAGATAACTACCCGATGGACCATGGTTATGAAGTTCATGCTGCTTCCCTGGAAACCCGAATTGGTCTTTACAGGGACATCTGTTATGGGAATTAACCCAGAAAATGGCAAGTTCTGCAGCCACGTGTTGAGGATTTACAAGACACCGGAATTGGAATCACCCAAGTGTCAAATATTGAAAAGGACGGCAAATTATGAGGTTAGACAGTATGATCCGTTCATAGTAGTAGAAACAAATGGAGACAAGTTATCTGGGTCTACTGGCTTTAATGATGTTGCTGGATATATATTTGGCAAGAATTCCACAAAAGAGAAGATACCAATGACTACTCCCGTCTTCACTCAAGCCATTGATACTGACTTGTCCAAAGTGTCAATCCAAATAGTTCTTCCATTAGACAAAGAAGCTAAGAGTTTGCCAAATCCTAGTCAAGAAACAGTTCGCTTGAGAGAGGTAGAAGGAGGCATTGCTGCAGTAATGAAGTTTAGTGGAAAACCAACAGAGGATATTGTTCGTGAAAAGGAGAAAATCTTGCGTTCCAATGTCATTAAAGATGGTCTTAAACCTCAGCTTGGTTGTTTGTTTGCCCGGTACAATGATCCAGGTCGAACTTGGAGCTTTATAATGTGTCTATTGGTCTGCTACTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01931	34846	38808	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001931s00037072.1	PF10184.4	DUF2358	76	185	5.30E-25
Glyur001931s00037072.1	PF04832.7	SOUL	195	345	8.10E-39

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.278
SRR1783600	control	0.408
SRR1783602	moderate drought stress	0.444
SRR1811619	moderate drought stress	0.538

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.087
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.095
DRR006522	Root Winter glycyrrhizin high producing strain	0.093
DRR006523	Root Summer glycyrrhizin low producing strain	0.101
DRR006524	Root Summer glycyrrhizin low producing strain	0.075
DRR006525	Leaf Summer glycyrrhizin high producing strain	47.394
DRR006526	Leaf Summer glycyrrhizin high producing strain	46.748

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	3.519
SRR2868004	Drought Stress (root)	6.689
SRR2967015	Control (root)	2.718

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	62.184
SRR9715740	Leaf	90.448
SRR9715741	Leaf	80.246
SRR9715739	Root	0.552
SRR9715742	Root	1.282
SRR9715743	Root	0.875

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.290
SRR8749028	MeJA induced 9h	0.757
SRR8749029	MeJA induced 9h	0.240
SRR8749030	Uninduced	0.161
SRR8749031	Uninduced	0.026
SRR8749032	Uninduced	0.013

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.731
SRR8400027	Control - Root	4.843