Gene detail information of Glyur001930s00032122 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004499028.1 | 3.11E-27 | PREDICTED: probable serine/threonine-protein kinase DDB_G0280133-like [Cicer arietinum] |
| trEMBL | tr|I1MXH0|I1MXH0_SOYBN | 1.00E-20 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G35250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01930 | 41104 | 41832 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.694 |
| SRR1783600 | control | 33.295 |
| SRR1783602 | moderate drought stress | 31.118 |
| SRR1811619 | moderate drought stress | 31.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.515 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.379 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.934 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.169 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.040 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.668 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.263 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.866 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.331 |
| SRR2868004 | Drought Stress (root) | 33.974 |
| SRR2967015 | Control (root) | 28.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.353 |
| SRR9715740 | Leaf | 17.487 |
| SRR9715741 | Leaf | 14.588 |
| SRR9715739 | Root | 4.730 |
| SRR9715742 | Root | 8.133 |
| SRR9715743 | Root | 9.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 96.925 |
| SRR8749028 | MeJA induced 9h | 89.211 |
| SRR8749029 | MeJA induced 9h | 101.878 |
| SRR8749030 | Uninduced | 56.646 |
| SRR8749031 | Uninduced | 39.620 |
| SRR8749032 | Uninduced | 34.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.779 |
| SRR8400027 | Control - Root | 38.650 |