Gene detail information of Glyur001930s00032115 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G59590.1 | 3.00E-21 | ZCF37 |
| NR | XP_003589063.1 | 1.14E-125 | hypothetical protein MTR_1g017990 [Medicago truncatula] |
| trEMBL | tr|G7ICB3|G7ICB3_MEDTR | 4.00E-126 | ZCF37, putative {ECO:0000313|EMBL:AES59314.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01930 | 14381 | 15283 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.918 |
| SRR1783600 | control | 0.892 |
| SRR1783602 | moderate drought stress | 1.423 |
| SRR1811619 | moderate drought stress | 1.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.602 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.896 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.735 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.636 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.952 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.952 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.441 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.777 |
| SRR2868004 | Drought Stress (root) | 55.197 |
| SRR2967015 | Control (root) | 28.655 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.986 |
| SRR9715740 | Leaf | 15.671 |
| SRR9715741 | Leaf | 52.725 |
| SRR9715739 | Root | 0.553 |
| SRR9715742 | Root | 1.256 |
| SRR9715743 | Root | 1.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.308 |
| SRR8749028 | MeJA induced 9h | 110.961 |
| SRR8749029 | MeJA induced 9h | 93.926 |
| SRR8749030 | Uninduced | 13.404 |
| SRR8749031 | Uninduced | 216.291 |
| SRR8749032 | Uninduced | 122.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.789 |
| SRR8400027 | Control - Root | 7.295 |