Gene detail information of Glyur001929s00041463 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G45210.1 | 6.00E-38 | SAUR-like auxin-responsive protein family |
| NR | XP_007161917.1 | 3.68E-65 | hypothetical protein PHAVU_001G108500g [Phaseolus vulgaris] |
| Swissprot | tr|P33080|AX10A_SOYBN | 1.00E-15 | Auxin-induced protein X10A |
| trEMBL | tr|V7CYC6|V7CYC6_PHAVU | 1.00E-65 | Uncharacterized protein {ECO:0000313|EMBL:ESW33911.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01929 | 6331 | 6816 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001929s00041463.1 | PF02519.9 | Auxin_inducible | 71 | 145 | 1.70E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.465 |
| SRR1783600 | control | 3.068 |
| SRR1783602 | moderate drought stress | 2.221 |
| SRR1811619 | moderate drought stress | 1.925 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.857 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.362 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.343 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.019 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 51.645 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 51.707 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.176 |
| SRR2868004 | Drought Stress (root) | 4.955 |
| SRR2967015 | Control (root) | 6.619 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 69.493 |
| SRR9715740 | Leaf | 159.693 |
| SRR9715741 | Leaf | 80.624 |
| SRR9715739 | Root | 6.535 |
| SRR9715742 | Root | 7.252 |
| SRR9715743 | Root | 6.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.301 |
| SRR8749028 | MeJA induced 9h | 0.138 |
| SRR8749029 | MeJA induced 9h | 0.410 |
| SRR8749030 | Uninduced | 7.637 |
| SRR8749031 | Uninduced | 1.244 |
| SRR8749032 | Uninduced | 1.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.341 |
| SRR8400027 | Control - Root | 5.053 |