Gene detail information of Glyur001926s00043651 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39870.1 | 5.00E-10 | |
| NR | XP_007163491.1 | 4.55E-121 | hypothetical protein PHAVU_001G238700g [Phaseolus vulgaris] |
| trEMBL | tr|V7D1S6|V7D1S6_PHAVU | 2.00E-121 | Uncharacterized protein {ECO:0000313|EMBL:ESW35485.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01926 | 27526 | 29676 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.624 |
| SRR1783600 | control | 13.538 |
| SRR1783602 | moderate drought stress | 10.806 |
| SRR1811619 | moderate drought stress | 10.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.967 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.606 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.263 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.196 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.723 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.459 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.599 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.576 |
| SRR2868004 | Drought Stress (root) | 22.707 |
| SRR2967015 | Control (root) | 33.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.659 |
| SRR9715740 | Leaf | 0.773 |
| SRR9715741 | Leaf | 2.860 |
| SRR9715739 | Root | 17.130 |
| SRR9715742 | Root | 9.718 |
| SRR9715743 | Root | 11.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 84.524 |
| SRR8749028 | MeJA induced 9h | 41.332 |
| SRR8749029 | MeJA induced 9h | 23.534 |
| SRR8749030 | Uninduced | 12.975 |
| SRR8749031 | Uninduced | 1.198 |
| SRR8749032 | Uninduced | 1.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.628 |
| SRR8400027 | Control - Root | 34.870 |