Gene detail

Gene detail information of Glyur001926s00043649

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G55700.1	7.00E-87	UDP-Glycosyltransferase superfamily protein
NR	XP_003600814.1	2.21E-174	UDP-glycosyltransferase 76G1 [Medicago truncatula]
COG	YP_004958904.1	3.00E-07	MGT family glycosyltransferase [Streptomyces bingchenggensis BCW-1]
Swissprot	tr\|Q9M052\|U76F1_ARATH	5.00E-115	UDP-glycosyltransferase 76F1
trEMBL	tr\|G7JAK1\|G7JAK1_MEDTR	8.00E-175	UDP-glucosyltransferase family protein {ECO:0000313\|EMBL:AES71065.1}

Sequence

Transcript Sequence

>Glyur001926s00043649.1
ATGTTGCATTTTATAGAATCTAAATTGGAGGAGGCAGTGGCAGAGCTACCACCACTCAGGGTGAAAGACTTACCTATGTTCAACACAAAGGAGCCAGAGAAATACTACCAATTAATATGCAACTTCATCAACGCAACCAAGGGCTCACTAGGAGTGATTTGGAACTCCTTTAAAGAATTAGAATCCCCTGCACTATCAACACTGACCCAACAATTCTCAATCCCAATGTTCCCAATAGGCCCCTTTCACAAGCACTTTATTCCTGTTACCACTACCTCGTCTTCTAGTTCTAGCAGCTTAATACCGCAAGACCAAAACTGCATCTCCTGGTTAGACAAACACAAACCCAACACTGTGATCTATGTGAGTTTTGGCAGTGTTGCTGCAATAACTGAAACAGAGTTTTTGGAGGTGGCTTATGGTTTGGCCAATAGCAAGCACCCATTTTTATGGGTGGTTCGACCGGGATTGATCCGTGGCCATGAATGGCTCGAACCGTTGCCAATTGGGTTCGTGGAGAATCTAGAAGGAAGAGGCTTTATTGTGAAATGGGCCCCACAGCAGGAAGTTCTTGCTCACCCTGCTACTGGTTTGTTTTGGACTCACAATGGTTGGAATTCAACGTTGGAGAGTGTGTGTGAAGGGGTTCCCATGATATGCATGCCTTGTTTCACGGACCAAAAGGTGAATGCGAGGTATGTGAGTTGTGTTTGGAGGGTTGGGTTGCAATTAGAGAAGGGTGTGGAGAGAGGGGAAATAGAGAGGACCATTAGGAAAATGATGATGGTGGAGGAAGAAGAAGAAGAAGACAATGGTGAAGGGAAGGAGATTAGAGATAGAGCCTTGAAATTGAAGGAAGAGGCAAAGCTTTGCTTGGAGCAAGGTGGTTCCTCTTGCTCTTCTTTGGAAGGCTTGGTTGCATACATCTTGTCATTGGAGGCATTTACATTTGAAGCTTCACATGAGCTTGGGTCTCTTAACTCCGCAACAGACTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01926	394	1389	+

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001926s00043649.1	PF00201.13	UDPGT	114	254	3.30E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.543
SRR1783600	control	0.610
SRR1783602	moderate drought stress	0.210
SRR1811619	moderate drought stress	0.163

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.142
DRR006520	Root Summer glycyrrhizin high producing strain	0.162
DRR006521	Root Winter glycyrrhizin high producing strain	0.391
DRR006522	Root Winter glycyrrhizin high producing strain	0.405
DRR006523	Root Summer glycyrrhizin low producing strain	2.066
DRR006524	Root Summer glycyrrhizin low producing strain	1.528
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.663
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.331

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.734
SRR2868004	Drought Stress (root)	3.445
SRR2967015	Control (root)	4.141

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.451
SRR9715740	Leaf	0.027
SRR9715741	Leaf	0.109
SRR9715739	Root	0.066
SRR9715742	Root	0.262
SRR9715743	Root	0.338

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.009
SRR8749028	MeJA induced 9h	0.056
SRR8749029	MeJA induced 9h	0.085
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.100
SRR8400027	Control - Root	2.218