Gene detail information of Glyur001921s00043776 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006599482.1 | 7.17E-30 | PREDICTED: ethylene-responsive transcription factor ABR1-like isoform X3 [Glycine max] |
| trEMBL | tr|I1MP48|I1MP48_SOYBN | 3.00E-30 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G27950.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01921 | 41588 | 43822 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.098 |
| SRR1783600 | control | 0.082 |
| SRR1783602 | moderate drought stress | 1.481 |
| SRR1811619 | moderate drought stress | 1.407 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.098 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.197 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 104.366 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 100.933 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.964 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.273 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.087 |
| SRR2868004 | Drought Stress (root) | 4.326 |
| SRR2967015 | Control (root) | 3.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.759 |
| SRR9715740 | Leaf | 0.077 |
| SRR9715741 | Leaf | 1.992 |
| SRR9715739 | Root | 0.109 |
| SRR9715742 | Root | 1.569 |
| SRR9715743 | Root | 0.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.311 |
| SRR8749028 | MeJA induced 9h | 31.097 |
| SRR8749029 | MeJA induced 9h | 22.720 |
| SRR8749030 | Uninduced | 55.201 |
| SRR8749031 | Uninduced | 182.825 |
| SRR8749032 | Uninduced | 119.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.133 |
| SRR8400027 | Control - Root | 0.255 |