Gene detail information of Glyur001919s00031506 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G69420.2 | 1.00E-176 | DHHC-type zinc finger family protein |
| NR | XP_003518747.1 | 0 | PREDICTED: probable protein S-acyltransferase 22-like [Glycine max] |
| Swissprot | tr|Q9C533|ZDHC1_ARATH | 0 | Probable protein S-acyltransferase 22 |
| trEMBL | tr|I1JE91|I1JE91_SOYBN | 0 | S-acyltransferase {ECO:0000256|RuleBase:RU079119} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01919 | 11135 | 18110 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001919s00031506.1 | PF01529.15 | zf-DHHC | 163 | 312 | 2.50E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.517 |
| SRR1783600 | control | 15.504 |
| SRR1783602 | moderate drought stress | 19.462 |
| SRR1811619 | moderate drought stress | 19.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.203 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.099 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.519 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.372 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.693 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.424 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.003 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.585 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.963 |
| SRR2868004 | Drought Stress (root) | 31.122 |
| SRR2967015 | Control (root) | 36.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.962 |
| SRR9715740 | Leaf | 8.232 |
| SRR9715741 | Leaf | 8.689 |
| SRR9715739 | Root | 6.596 |
| SRR9715742 | Root | 17.670 |
| SRR9715743 | Root | 15.480 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.034 |
| SRR8749028 | MeJA induced 9h | 60.986 |
| SRR8749029 | MeJA induced 9h | 42.082 |
| SRR8749030 | Uninduced | 17.992 |
| SRR8749031 | Uninduced | 17.598 |
| SRR8749032 | Uninduced | 21.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.088 |
| SRR8400027 | Control - Root | 36.336 |