Gene detail information of Glyur001919s00031504 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G13970.1 | 7.00E-142 | Protein of unknown function (DUF1336) |
| NR | XP_004490125.1 | 0 | PREDICTED: uncharacterized protein LOC101490667 isoform X1 [Cicer arietinum] |
| Swissprot | tr|F4JSE7|EDR2_ARATH | 7.00E-08 | Protein ENHANCED DISEASE RESISTANCE 2 |
| trEMBL | tr|K7K7Q4|K7K7Q4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G12470.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01919 | 240 | 5831 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001919s00031504.1 | PF07059.7 | DUF1336 | 245 | 491 | 9.10E-78 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.960 |
| SRR1783600 | control | 5.028 |
| SRR1783602 | moderate drought stress | 4.359 |
| SRR1811619 | moderate drought stress | 4.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.201 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.325 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.215 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.194 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.429 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.250 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.379 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 40.170 |
| SRR2868004 | Drought Stress (root) | 56.577 |
| SRR2967015 | Control (root) | 68.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.512 |
| SRR9715740 | Leaf | 6.425 |
| SRR9715741 | Leaf | 9.241 |
| SRR9715739 | Root | 2.816 |
| SRR9715742 | Root | 12.394 |
| SRR9715743 | Root | 9.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.713 |
| SRR8749028 | MeJA induced 9h | 15.996 |
| SRR8749029 | MeJA induced 9h | 6.629 |
| SRR8749030 | Uninduced | 13.132 |
| SRR8749031 | Uninduced | 12.496 |
| SRR8749032 | Uninduced | 11.926 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.168 |
| SRR8400027 | Control - Root | 30.103 |