Gene detail information of Glyur001912s00034133 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17680.1 | 7.00E-33 | disease resistance protein (TIR-NBS-LRR class), putative |
| NR | KHN38341.1 | 0 | TMV resistance protein N [Glycine soja] |
| Swissprot | tr|Q9SZ67|WRK19_ARATH | 2.00E-28 | Probable WRKY transcription factor 19 |
| trEMBL | tr|K7KBB3|K7KBB3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G45362.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01912 | 28075 | 44726 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.648 |
| SRR1783600 | control | 6.623 |
| SRR1783602 | moderate drought stress | 3.045 |
| SRR1811619 | moderate drought stress | 3.075 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.223 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.171 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.170 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.153 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 43.627 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 44.268 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.324 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.494 |
| SRR2868004 | Drought Stress (root) | 6.922 |
| SRR2967015 | Control (root) | 6.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.647 |
| SRR9715740 | Leaf | 1.733 |
| SRR9715741 | Leaf | 8.664 |
| SRR9715739 | Root | 3.821 |
| SRR9715742 | Root | 36.233 |
| SRR9715743 | Root | 31.208 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.428 |
| SRR8749028 | MeJA induced 9h | 0.750 |
| SRR8749029 | MeJA induced 9h | 1.099 |
| SRR8749030 | Uninduced | 0.550 |
| SRR8749031 | Uninduced | 0.377 |
| SRR8749032 | Uninduced | 0.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.464 |
| SRR8400027 | Control - Root | 9.261 |