Gene detail information of Glyur001911s00038495 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G38350.1 | 2.00E-08 | Disease resistance protein (NBS-LRR class) family |
| NR | KEH23201.1 | 1.34E-75 | hypothetical protein MTR_7g069090 [Medicago truncatula] |
| Swissprot | tr|Q9FKZ1|DRL42_ARATH | 2.00E-07 | Probable disease resistance protein At5g66900 |
| trEMBL | tr|A0A072U176|A0A072U176_MEDTR | 5.00E-76 | Uncharacterized protein {ECO:0000313|EMBL:KEH23201.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01911 | 7509 | 10281 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001911s00038495.1 | PF00560.28 | LRR_1 | 29 | 49 | 0.13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.685 |
| SRR1783600 | control | 0.635 |
| SRR1783602 | moderate drought stress | 0.097 |
| SRR1811619 | moderate drought stress | 0.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.675 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.834 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.410 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.161 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.502 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.833 |
| SRR2868004 | Drought Stress (root) | 7.903 |
| SRR2967015 | Control (root) | 2.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.788 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 39.327 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 5.702 |
| SRR9715743 | Root | 6.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.043 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.097 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.448 |
| SRR8400027 | Control - Root | 4.088 |