Gene detail information of Glyur001911s00038492 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17600.1 | 1.00E-05 | Disease resistance protein (TIR-NBS-LRR class) family |
| NR | XP_003596687.1 | 4.48E-17 | Disease-resistance protein [Medicago truncatula] |
| Swissprot | tr|Q9SSN3|TIR_ARATH | 2.00E-06 | Toll/interleukin-1 receptor-like protein |
| trEMBL | tr|G7IM52|G7IM52_MEDTR | 2.00E-17 | Disease resistance protein (TIR-NBS-LRR class), putative {ECO:0000313|EMBL:AES66938.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01911 | 30 | 185 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.643 |
| SRR1783600 | control | 1.459 |
| SRR1783602 | moderate drought stress | 0.262 |
| SRR1811619 | moderate drought stress | 0.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 39.310 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.364 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.978 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.698 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.470 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.798 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.094 |
| SRR2868004 | Drought Stress (root) | 0.354 |
| SRR2967015 | Control (root) | 0.329 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.975 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 11.412 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 27.471 |
| SRR9715743 | Root | 12.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.712 |
| SRR8400027 | Control - Root | 7.355 |