Gene detail information of Glyur001908s00030725 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39570.1 | 3.00E-80 | ACT domain-containing protein |
| NR | AES67600.2 | 3.55E-173 | four ACT domain ACT domain protein which protein [Medicago truncatula] |
| Swissprot | tr|O80644|ACR9_ARATH | 5.00E-97 | ACT domain-containing protein ACR9 {ECO:0000305} |
| trEMBL | tr|G7IHN7|G7IHN7_MEDTR | 1.00E-173 | Four ACT domain ACT domain protein which protein {ECO:0000313|EMBL:AES67600.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01908 | 20414 | 22627 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001908s00030725.1 | PF01842.20 | ACT | 111 | 162 | 4.80E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.265 |
| SRR1783600 | control | 3.536 |
| SRR1783602 | moderate drought stress | 5.121 |
| SRR1811619 | moderate drought stress | 5.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.852 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.703 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.144 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.143 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.299 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.312 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.476 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.531 |
| SRR2868004 | Drought Stress (root) | 12.895 |
| SRR2967015 | Control (root) | 14.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.986 |
| SRR9715740 | Leaf | 5.769 |
| SRR9715741 | Leaf | 2.664 |
| SRR9715739 | Root | 1.731 |
| SRR9715742 | Root | 0.225 |
| SRR9715743 | Root | 0.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.921 |
| SRR8749028 | MeJA induced 9h | 3.030 |
| SRR8749029 | MeJA induced 9h | 0.721 |
| SRR8749030 | Uninduced | 2.146 |
| SRR8749031 | Uninduced | 0.274 |
| SRR8749032 | Uninduced | 0.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.680 |
| SRR8400027 | Control - Root | 3.877 |