Gene detail information of Glyur001907s00034846 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G71990.1 | 3.00E-04 | fucosyltransferase 13 |
| NR | XP_004496381.1 | 8.95E-19 | PREDICTED: alpha-(1,4)-fucosyltransferase-like [Cicer arietinum] |
| Swissprot | tr|Q9C8W3|FUT13_ARATH | 2.00E-08 | Alpha-(1,4)-fucosyltransferase |
| trEMBL | tr|A0A072VP38|A0A072VP38_MEDTR | 6.00E-19 | Alpha-(1,4)-fucosyltransferase-like protein {ECO:0000313|EMBL:KEH43582.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01907 | 1366 | 1740 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.661 |
| SRR1783600 | control | 1.250 |
| SRR1783602 | moderate drought stress | 2.365 |
| SRR1811619 | moderate drought stress | 4.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.151 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.797 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.880 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.295 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.496 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.853 |
| SRR2868004 | Drought Stress (root) | 0.905 |
| SRR2967015 | Control (root) | 1.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 1.873 |
| SRR9715742 | Root | 0.404 |
| SRR9715743 | Root | 1.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.276 |
| SRR8749028 | MeJA induced 9h | 0.028 |
| SRR8749029 | MeJA induced 9h | 0.361 |
| SRR8749030 | Uninduced | 0.205 |
| SRR8749031 | Uninduced | 0.235 |
| SRR8749032 | Uninduced | 0.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.208 |
| SRR8400027 | Control - Root | 1.818 |